RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CHST9Q7L1S5 443 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 OTOAQ7RTW8 1153 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 CACNA2D4Q7Z3S7 1137 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 BMP8AQ7Z5Y6 402 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 CEP57Q86XR8 500 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 MIB1Q86YT6 1006 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 RHPN2Q8IUC4 686 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 RHOT2Q8IXI1 618 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 FAM217AQ8IXS0 508 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ANKRD35Q8N283 1001 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 LRRC43Q8N309 656 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 DTWD1Q8N5C7 304 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 CELF5Q8N6W0 485 aaKnown RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 FAM71DQ8N9W8 422 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 TNIP2Q8NFZ5 429 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 LINS1Q8NG48 757 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ABHD5Q8WTS1 349 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ANKRD49Q8WVL7 239 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 HMGB4Q8WW32 186 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 EZH1Q92800 747 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 HOXB13Q92826 284 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 FAM149B1Q96BN6 582 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF837Q96EG3 531 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 SAT2Q96F10 170 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 C5orf34Q96MH7 638 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 PSMG3-AS1Q96PY0 264 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 FAM111AQ96PZ2 611 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 MDFIQ99750 246 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 SH3GL2Q99962 352 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 NUDT22Q9BRQ3 303 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 NAA11Q9BSU3 229 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 MLPHQ9BV36 600 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 SIK2Q9H0K1 926 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 RWDD1Q9H446 243 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 UNKLQ9H9P5 680 aaKnown RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 BCO1Q9HAY6 547 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 FAM105AQ9NUU6 356 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 RLIMQ9NVW2 624 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ALKBH4Q9NXW9 302 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 NINJ2Q9NZG7 142 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 MPP6Q9NZW5 540 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ARHGAP20Q9P2F6 1191 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 HECAQ9UBI9 543 aaPredicted RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ASH2LQ9UBL3 628 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 DKK4Q9UBT3 224 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 AMACRQ9UHK6 382 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 OSGIN1Q9UJX0 560 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 CPSF3Q9UKF6 684 aaKnown RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 SARDHQ9UL12 918 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 MTMR6Q9Y217 621 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 SNX14Q9Y5W7 946 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ACTL7BQ9Y614 415 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 NUP153P49790 1475 aaKnown RBP3.02□□□□□ -1.93
HMGN4-202ENST00000477243 NCOA2Q15596 1464 aa3.02□□□□□ -1.93
HMGN4-202ENST00000477243 ZC3H13Q5T200 1668 aaKnown RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 ATP8B3O60423 1300 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 AOX1Q06278 1338 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 TIAM1Q13009 1591 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 PKD1L1Q8TDX9 2849 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 FRMD3A2A2Y4 597 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 A4D1N5 150 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 URADA6NGE7 173 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 FAM90A20PA6NIJ5 464 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SH2D7A6NKC9 451 aaPredicted RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 M0QX08 132 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 CTDSP2O14595 271 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 PCDH17O14917 1159 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 GRM6O15303 877 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 TNFSF14O43557 240 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 GDF9O60383 454 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 GPR32O75388 356 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SEC24DO94855 1032 aaPredicted RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 REC8O95072 547 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SIX3O95343 332 aaPredicted RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 TIAF1O95411 115 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 ADCY5O95622 1261 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 GASTP01350 101 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 GJB1P08034 283 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 LTA4HP09960 611 aaKnown RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 KRT5P13647 590 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 COX7A2P14406 83 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 DRD2P14416 443 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 MCM3P25205 808 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 KLRK1P26718 216 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 MST1P26927 711 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 APEX1P27695 318 aaKnown RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 BMPR1AP36894 532 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 MTIF2P46199 727 aaKnown RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 CPA2P48052 419 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SLC6A11P48066 632 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SLC6A9P48067 706 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SLC11A2P49281 568 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 CAPZA1P52907 286 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 ATXN3P54252 364 aaPredicted RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 WNT3P56703 355 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 CORO7P57737 925 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 YBEYP58557 167 aaPredicted RBP3.01□□□□□ -1.93
HMGN4-202ENST00000477243 SATB1Q01826 763 aa3.01□□□□□ -1.93
HMGN4-202ENST00000477243 TEKQ02763 1124 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms