RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 TMCC3Q9ULS5 477 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 MAFFQ9ULX9 164 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 SLC12A4Q9UP95 1085 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 LIMCH1Q9UPQ0 1083 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 MTMR6Q9Y217 621 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 LRCH1Q9Y2L9 728 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 FAM32AQ9Y421 112 aaKnown RBP4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 TIMM22Q9Y584 194 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 PPRC1Q5VV67 1664 aaKnown RBP4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 BCL9O00512 1426 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 PZPP20742 1482 aa4.69□□□□□ -1.66
PIKFYVE-209ENST00000477200 NUP155O75694 1391 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CEMIPQ8WUJ3 1361 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ABCC12Q96J65 1359 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 PLEKHG1Q9ULL1 1385 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CCDC195A0A1B0GUA6 201 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SMIM31A0A1B0GVY4 71 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 KANSL1LA0AUZ9 987 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 MAGEA13PA6NCF6 341 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CCT8L1PA6NM43 557 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 GOLGA8TH3BQL2 631 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CHL1O00533 1208 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 TOR1BO14657 336 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CETN3O15182 167 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SGTAO43765 313 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 MAP4K4O95819 1239 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ITGA2BP08514 1039 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 GOLGA8HP0CJ92 632 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SNHG28P0DPA3 235 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 TRIM27P14373 513 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 IBSPP21815 317 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CASP14P31944 242 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 HSPA9P38646 679 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SKIV2L2P42285 1042 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ACADSBP45954 432 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CLK1P49759 484 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 PEX5P50542 639 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 POLGP54098 1239 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CTXN1P60606 82 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 HPCAP84074 193 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 DR1Q01658 176 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CYLC2Q14093 348 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 RASA2Q15283 850 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ME3Q16798 604 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SYDE2Q5VT97 1194 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 TMEM154Q6P9G4 183 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CYP26C1Q6V0L0 522 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CCNI2Q6ZMN8 369 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 PCGF5Q86SE9 256 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ZDHHC17Q8IUH5 632 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 GRAMD2AQ8IUY3 354 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CFAP52Q8N1V2 620 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CLASRPQ8N2M8 674 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 AGAP11Q8TF27 550 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 AENQ8WTP8 325 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ATRIPQ8WXE1 791 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CDKL2Q92772 493 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 RUNDC1Q96C34 613 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SDCCAG3Q96C92 435 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 VMP1Q96GC9 406 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 VPS50Q96JG6 964 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CCDC42Q96M95 316 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 RAB3IPQ96QF0 476 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 MAP3K14Q99558 947 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 HGH1Q9BTY7 390 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SELENOOQ9BVL4 669 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 VTA1Q9NP79 307 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 TCF7L2Q9NQB0 619 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SAMSN1Q9NSI8 373 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 FAIMQ9NVQ4 179 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 RHBDL2Q9NX52 303 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 EURLQ9NYK6 297 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 STK39Q9UEW8 545 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 SCAF8Q9UPN6 1271 aaKnown RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 OVOS2A0A0G2JMS6 1433 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 OVOS2A0A0J9YW53 1432 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 NPHP4O75161 1426 aaPredicted RBP4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 OVOS2Q6IE36 1432 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 POGZQ7Z3K3 1410 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 MROH7Q68CQ1 1323 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 WDR7Q9Y4E6 1490 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 KDM6BO15054 1643 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 CASZ1Q86V15 1759 aa4.68□□□□□ -1.66
PIKFYVE-209ENST00000477200 ABCC3O15438 1527 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 MYO5CQ9NQX4 1742 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 A0A0J9YVX5 310 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 IQANK1A0A1B0GTG1 560 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 DYTNA2CJ06 578 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 FAM171A2A8MVW0 826 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 E7EVH7 732 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 KMOO15229 486 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 GRM6O15303 877 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 TRAPPC3O43617 180 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 LCA5LO95447 670 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 RHOXF2BP0C7M4 288 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 EBLN1P0CF75 366 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 TGFB3P10600 412 aa4.67□□□□□ -1.66
PIKFYVE-209ENST00000477200 CYP2C9P11712 490 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms