RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 ZNF571Q7Z3V5 609 aaPredicted RBP12.66□□□□□ -0.38
PRKD3-209ENST00000477132 FAM131BQ86XD5 332 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 CACUL1Q86Y37 369 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 C3orf20Q8ND61 904 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 RPRD1AQ96P16 312 aaPredicted RBP12.66□□□□□ -0.38
PRKD3-209ENST00000477132 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 ARRDC1-AS1Q9H2J1 176 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 AIPL1Q9NZN9 384 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 DMXL1Q9Y485 3027 aa12.66□□□□□ -0.38
PRKD3-209ENST00000477132 CHD5Q8TDI0 1954 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 ZNF292O60281 2723 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 IGHV1OR15-9A0A0B4J2B8 117 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 15.8
PRKD3-209ENST00000477132 F9P00740 461 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 CALB1P05937 261 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 SKILP12757 684 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 PDGFRAP16234 1089 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 POLR2EP19388 210 aaKnown RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 TNFAIP3P21580 790 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 RRM1P23921 792 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 HDAC4P56524 1084 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 STARD3Q14849 445 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 PLEKHG6Q3KR16 790 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 RABGAP1LQ5R372 815 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 PPP1R15BQ5SWA1 713 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 TTC39BQ5VTQ0 682 aaPredicted RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 SFMBT2Q5VUG0 894 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 ACAD10Q6JQN1 1059 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 KIAA1324Q6UXG2 1013 aaKnown RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 ALG14Q96F25 216 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 LOXL4Q96JB6 756 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 MAGEB5Q9BZ81 275 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 XPO4Q9C0E2 1151 aaKnown RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 SEMA4GQ9NTN9 838 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 KIAA1522Q9P206 1035 aaPredicted RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 USP18Q9UMW8 372 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 CYP8B1Q9UNU6 501 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.38
PRKD3-209ENST00000477132 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
PRKD3-209ENST00000477132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 CCP110O43303 1012 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 GYPCP04921 128 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ATP5BP06576 529 aaKnown RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 KRT3P12035 628 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 GPD1P21695 349 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 SDC4P31431 198 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 MPLP40238 635 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PTGER3P43115 390 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PTPN9P43378 593 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 STK19P49842 368 aaPredicted RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 OGDHQ02218 1023 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 CAMK2GQ13555 558 aaPredicted RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ELF2Q15723 593 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PLA2G2CQ5R387 149 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 HGSNATQ68CP4 663 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 WDR59Q6PJI9 974 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 SND1Q7KZF4 910 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 DEFB119Q8N690 84 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 CCDC185Q8N715 623 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 CENPIQ92674 756 aaPredicted RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 SPACA7Q96KW9 195 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 EDEM3Q9BZQ6 932 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PRDM16Q9HAZ2 1276 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 USP36Q9P275 1121 aaKnown RBP12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ZNF212Q9UDV6 495 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ERVW-1Q9UQF0 538 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 OR51B4Q9Y5P0 310 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
PRKD3-209ENST00000477132 ADAMTS9Q9P2N4 1935 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 IGLV3-10A0A075B6K4 115 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 A0A1W2PQJ5 194 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 SIGLEC16A6NMB1 481 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 DRGXA6NNA5 263 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 E9PAM4 449 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 SYNCRIPO60506 623 aaKnown RBP12.63□□□□□ -0.39
PRKD3-209ENST00000477132 LRP3O75074 770 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 ASLP04424 464 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 PLEKP08567 350 aaPredicted RBP12.63□□□□□ -0.39
PRKD3-209ENST00000477132 PLK1P53350 603 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 CREB5Q02930 508 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 KLHL30Q0D2K2 578 aa12.63□□□□□ -0.39
PRKD3-209ENST00000477132 MTA1Q13330 715 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms