RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 SLC2A13Q96QE2 648 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 PABPC3Q9H361 631 aaKnown RBP13.85□□□□□ -0.19
APTX-221ENST00000477119 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 FBXL12Q9NXK8 326 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 CEP295Q9C0D2 2601 aa13.85□□□□□ -0.19
APTX-221ENST00000477119 PCDH15Q96QU1 1955 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 TARSL2A2RTX5 802 aaKnown RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 TRIM16O95361 564 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 CER1O95813 267 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 ERBB2P04626 1255 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 PRKCSHP14314 528 aaPredicted RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 PDGFRAP16234 1089 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 CD27P26842 260 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 SLC8A1P32418 973 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 CLCN1P35523 988 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 SNX16P57768 344 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 SFSWAPQ12872 951 aaKnown RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 NME3Q13232 169 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 TEAD4Q15561 434 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 CST6Q15828 149 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 FAM183BPQ6ZVS7 135 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 USP30Q70CQ3 517 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 PRMT1Q99873 361 aaKnown RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 OMDQ99983 421 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 TM9SF3Q9HD45 589 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 TM7SF3Q9NS93 570 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 ASNSD1Q9NWL6 643 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 KLK13Q9UKR3 277 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 SCML1Q9UN30 329 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 FNDC3AQ9Y2H6 1198 aaKnown RBP13.84□□□□□ -0.19
APTX-221ENST00000477119 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 GON4LQ3T8J9 2241 aa13.84□□□□□ -0.19
APTX-221ENST00000477119 EDDM13A0A1B0GTR0 161 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 A0A1W2PP55 124 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 KCNK3O14649 394 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 MID1O15344 667 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 MZF1P28698 734 aaPredicted RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 NNMTP40261 264 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 STK19P49842 368 aaPredicted RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 GALCP54803 685 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 BPIFB4P59827 614 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 SLC6A3Q01959 620 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 SLC12A1Q13621 1099 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 ZNF423Q2M1K9 1284 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 RABGAP1LQ5R372 815 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 OLFML1Q6UWY5 402 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 FAM71AQ8IYT1 594 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 RPRD1AQ96P16 312 aaPredicted RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 TUBGCP2Q9BSJ2 902 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 TMEM121BQ9BXQ6 578 aaPredicted RBP13.83□□□□□ -0.2
APTX-221ENST00000477119 NEUROG2Q9H2A3 272 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 DACH1Q9UI36 760 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 ANKRD6Q9Y2G4 727 aa13.83□□□□□ -0.2
APTX-221ENST00000477119 A0A1B0GVM2 712 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 TCAF2A6NFQ2 919 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 M0QYT0 321 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 IGHV4-34P06331 123 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 ERCC5P28715 1186 aaPredicted RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 NOS2P35228 1153 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 PSMD8P48556 350 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 PLK1P53350 603 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 OXCT1P55809 520 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 RNASE9P60153 205 aaKnown RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 CENPCQ03188 943 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 MIIPQ5JXC2 388 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 TTC39BQ5VTQ0 682 aaPredicted RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 SLC26A9Q7LBE3 791 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 PNPLA1Q8N8W4 532 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 KDF1Q8NAX2 398 aaPredicted RBP13.82□□□□□ -0.2
APTX-221ENST00000477119 GATA6Q92908 595 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 PTPRN2Q92932 1015 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 IGSF8Q969P0 613 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
APTX-221ENST00000477119 VANGL2Q9ULK5 521 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms