RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NUGGCQ68CJ6 796 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 DENND1CQ8IV53 801 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 PPIL6Q8IXY8 311 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ARL14EPQ8N8R7 260 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-206ENST00000477085 OR2W6PQ8NHA6 318 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 HDAC11Q96DB2 347 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 CATSPERBQ9H7T0 1116 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 ETNK1Q9HBU6 452 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 TRPC7Q9HCX4 862 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 RAB6BQ9NRW1 208 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
COL4A6-206ENST00000477085 TRANK1O15050 2925 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 A0A0A0MRY4 1105 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 RNF103O00237 685 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 RHOQP17081 205 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 TACR2P21452 398 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 COG7P83436 770 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 GPM6BQ13491 265 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 MSS51Q4VC12 460 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 FNBP1LQ5T0N5 605 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ALS2CLQ60I27 953 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 RFWD3Q6PCD5 774 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 PDZD4Q76G19 769 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 TFAP2DQ7Z6R9 452 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ADGRD2Q7Z7M1 963 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ZNF567Q8N184 647 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 UBLCP1Q8WVY7 318 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ZNF419Q96HQ0 510 aaPredicted RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 SPATA13Q96N96 652 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 GDF15Q99988 308 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 CORO1BQ9BR76 489 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ZYG11BQ9C0D3 744 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 PABPC3Q9H361 631 aaKnown RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 MAN1C1Q9NR34 630 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 AGO1Q9UL18 857 aaKnown RBP14.84□□□□□ -0.03
COL4A6-206ENST00000477085 SHOC2Q9UQ13 582 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 PLAAQ9Y263 795 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 ANAPC1Q9H1A4 1944 aa14.84□□□□□ -0.03
COL4A6-206ENST00000477085 GOLGA6BA6NDN3 693 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 NCAM2O15394 837 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 MAFKO60675 156 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 BANF1O75531 89 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 SHBGP04278 402 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 IRF1P10914 325 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PTPN3P26045 913 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 CORO1AP31146 461 aaKnown RBP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 SERPINB6P35237 376 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 SGSHP51688 502 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 FAM193AP78312 1265 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 ZBTB17Q13105 803 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 MTM1Q13496 603 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 FASTKD3Q14CZ7 662 aaKnown RBP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 C5orf22Q49AR2 442 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PABPC1LQ4VXU2 614 aaKnown RBP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PPM1LQ5SGD2 360 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 CFAP58Q5T655 872 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PCGF5Q86SE9 256 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 CHSY1Q86X52 802 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 CFAP52Q8N1V2 620 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PLD4Q96BZ4 506 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 GORASP1Q9BQQ3 440 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 WDR83Q9BRX9 315 aaKnown RBP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 CDC42EP4Q9H3Q1 356 aaKnown RBP14.83□□□□□ -0.03
COL4A6-206ENST00000477085 TMEM248Q9NWD8 314 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 SEPT10Q9P0V9 454 aa14.83□□□□□ -0.03
COL4A6-206ENST00000477085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 A0A1W2PRU2 124 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 EPOPA6NHQ4 379 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 F5H423 210 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 DFFAO00273 331 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 TRDMT1O14717 391 aaKnown RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 SCAMP3O14828 347 aaKnown RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 RIPK2O43353 540 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 MOSPD3O75425 235 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 MBL2P11226 248 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 HDCP19113 662 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 MX2P20592 715 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 MAGEA6P43360 314 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 HARS2P49590 506 aaKnown RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 SLC29A2Q14542 456 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 SLMAPQ14BN4 828 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 HP1BP3Q5SSJ5 553 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 LRRC31Q6UY01 552 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 RBM23Q86U06 439 aaKnown RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 HOOK3Q86VS8 718 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 RELL1Q8IUW5 271 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 LGI2Q8N0V4 545 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 UMODL1-AS1Q8N2C9 162 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 LZTR1Q8N653 840 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 MAB21L3Q8N8X9 362 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 TCEAL4Q96EI5 215 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 PRICKLE1Q96MT3 831 aaPredicted RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 TSGA13Q96PP4 275 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 NKX2-4Q9H2Z4 354 aa14.83□□□□□ -0.04
COL4A6-206ENST00000477085 DNMT3BQ9UBC3 853 aaKnown RBP14.83□□□□□ -0.04
COL4A6-206ENST00000477085 OBSL1O75147 1896 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 CHADO15335 359 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 MYL4P12829 197 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms