RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ADAMTS19Q8TE59 1207 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 TIFAQ96CG3 184 aa29.65■■■□□ 2.34
VEGFA-211ENST00000476772 TRAV19A0A0A6YYK7 116 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 F5H5T6 163 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 NCAM2O15394 837 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 FGF19O95750 216 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 RFWD3Q6PCD5 774 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 ARHGAP12Q8IWW6 846 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 LGI2Q8N0V4 545 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 LZTR1Q8N653 840 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 BBOF1Q8ND07 529 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 HTR3CQ8WXA8 447 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 LRRC45Q96CN5 670 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 PRKD2Q9BZL6 878 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 ADAM7Q9H2U9 754 aa29.64■■■□□ 2.34
VEGFA-211ENST00000476772 AGO1Q9UL18 857 aaKnown RBP29.64■■■□□ 2.34
VEGFA-211ENST00000476772 CCDC195A0A1B0GUA6 201 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 MOSPD3O75425 235 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 MX2P20592 715 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 ELMSAN1Q6PJG2 1045 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 TFAP2DQ7Z6R9 452 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 CIR1Q86X95 450 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-211ENST00000476772 ZNF707Q96C28 371 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-211ENST00000476772 SLC46A2Q9BY10 475 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 FAM129AQ9BZQ8 928 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 TMEM248Q9NWD8 314 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 ANAPC5Q9UJX4 755 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 NUP205Q92621 2012 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 NOTCH4Q99466 2003 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 GARSP41250 739 aaKnown RBP29.63■■■□□ 2.33
VEGFA-211ENST00000476772 NTHL1P78549 312 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 SLC7A9P82251 487 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 SLC5A9Q2M3M2 681 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 RHBDF2Q6PJF5 856 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 TAB3Q8N5C8 712 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-211ENST00000476772 DEPDC1BQ8WUY9 529 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 HDAC11Q96DB2 347 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 P2RY11Q96G91 374 aa29.63■■■□□ 2.33
VEGFA-211ENST00000476772 TPX2Q9ULW0 747 aaKnown RBP29.63■■■□□ 2.33
VEGFA-211ENST00000476772 CDH23Q9H251 3354 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 POU2F2P09086 479 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 ACTN2P35609 894 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 PPIDQ08752 370 aaKnown RBP29.62■■■□□ 2.33
VEGFA-211ENST00000476772 TEAD2Q15562 447 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 GPR158Q5T848 1215 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 HIBCHQ6NVY1 386 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-211ENST00000476772 GRASPQ7Z6J2 395 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-211ENST00000476772 CCDC110Q8TBZ0 833 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 SLC39A8Q9C0K1 460 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 PAK5Q9P286 719 aa29.62■■■□□ 2.33
VEGFA-211ENST00000476772 MTRF1LQ9UGC7 380 aaKnown RBP29.62■■■□□ 2.33
VEGFA-211ENST00000476772 DFFAO00273 331 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 PFKLP17858 780 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 C5orf22Q49AR2 442 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 AFMIDQ63HM1 303 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 LEMD2Q8NC56 503 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 VN1R2Q8NFZ6 395 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 FUT8Q9BYC5 575 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 BRD8Q9H0E9 1235 aa29.61■■■□□ 2.33
VEGFA-211ENST00000476772 C5orf60A6NFR6 353 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 SCAMP3O14828 347 aaKnown RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 GREM1O60565 184 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 GCATO75600 419 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 CAV1Q03135 178 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 ADGRF1Q5T601 910 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 RNASEH2BQ5TBB1 312 aaKnown RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 CFAP52Q8N1V2 620 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 C12orf76Q8N812 135 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 MRPL38Q96DV4 380 aaKnown RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 PRICKLE1Q96MT3 831 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 NOL6Q9H6R4 1146 aaKnown RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 SEPT10Q9P0V9 454 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 ZNF212Q9UDV6 495 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 TRDMT1O14717 391 aaKnown RBP29.6■■■□□ 2.33
VEGFA-211ENST00000476772 CASP8Q14790 479 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 PRSS36Q5K4E3 855 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 TTC16Q8NEE8 873 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 STOML2Q9UJZ1 356 aa29.6■■■□□ 2.33
VEGFA-211ENST00000476772 HELZP42694 1942 aaKnown RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 RNF103O00237 685 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 LATS1O95835 1130 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 DDX6P26196 483 aaKnown RBP eCLIP29.59■■■□□ 2.332e-18■□□□□ 9.6
VEGFA-211ENST00000476772 KCNC3Q14003 757 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 ARHGAP15Q53QZ3 475 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 Q6ZNB5 142 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 ARHGAP36Q6ZRI8 547 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 HDXQ7Z353 690 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 UMODL1-AS1Q8N2C9 162 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 CPT1BQ92523 772 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 FERMT1Q9BQL6 677 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 SMG9Q9H0W8 520 aaKnown RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 DONSONQ9NYP3 566 aa29.59■■■□□ 2.33
VEGFA-211ENST00000476772 FARP1Q9Y4F1 1045 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 ZFP37Q9Y6Q3 630 aaPredicted RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 NYNRINQ9P2P1 1898 aaKnown RBP29.59■■■□□ 2.33
VEGFA-211ENST00000476772 SHROOM3Q8TF72 1996 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 KCNK1O00180 336 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 SASH3O75995 380 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 BASP1P80723 227 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms