RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SLC12A1Q13621 1099 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 C2orf27AQ580R0 203 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 FSCBQ5H9T9 825 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 FAM72AQ5TYM5 149 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 FAM72DQ6L9T8 149 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 KIAA0907Q7Z7F0 614 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-208ENST00000476342 FAM72BQ86X60 149 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 SPEM1Q8N4L4 309 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 ZNF513Q8N8E2 541 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-208ENST00000476342 USP33Q8TEY7 942 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 ACDQ96AP0 544 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 PPP1R9BQ96SB3 815 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 MAGEB5Q9BZ81 275 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 SPATA6Q9NWH7 488 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-208ENST00000476342 GPATCH2LQ9NWQ4 482 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 TMEM110-MUSTN1A8MSY1 372 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 CHURC1-FNTBB4DL54 471 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 CREB3O43889 395 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 HTR7P34969 479 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 TIE1P35590 1138 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 SLC25A11Q02978 314 aaKnown RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 MTAPQ13126 283 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 GAS6Q14393 721 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 HSF5Q4G112 596 aaPredicted RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 CYP4V2Q6ZWL3 525 aaPredicted RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 TRMT11Q7Z4G4 463 aaKnown RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 SETD3Q86TU7 594 aaPredicted RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 CALR3Q96L12 384 aaKnown RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 CIPCQ9C0C6 399 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 ZWILCHQ9H900 591 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 ELOVL2Q9NXB9 296 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 TFR2Q9UP52 801 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 TBC1D30Q9Y2I9 924 aa30.42■■■□□ 2.46
HOXB3-208ENST00000476342 MYO18AQ92614 2054 aaKnown RBP30.42■■■□□ 2.46
HOXB3-208ENST00000476342 IL1R2P27930 398 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 ZNF135P52742 658 aaPredicted RBP30.41■■■□□ 2.46
HOXB3-208ENST00000476342 SEMA3BQ13214 749 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 DMC1Q14565 340 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 CXorf57Q6NSI4 855 aaKnown RBP30.41■■■□□ 2.46
HOXB3-208ENST00000476342 TFAP2DQ7Z6R9 452 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 TEKT4Q8WW24 435 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 LMLNQ96KR4 655 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 DESI2Q9BSY9 194 aa30.41■■■□□ 2.46
HOXB3-208ENST00000476342 TCF4P15884 667 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 RHOQP17081 205 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 EPHB2P29323 1055 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 OR1E1P30953 314 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 SMTNL2Q2TAL5 461 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 KCNT1Q5JUK3 1230 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 ARTNQ5T4W7 220 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 C6orf118Q5T5N4 469 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 MAMSTRQ6ZN01 415 aa30.4■■■□□ 2.46
HOXB3-208ENST00000476342 RCCD1A6NED2 376 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 BTNL10A8MVZ5 291 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 NPC1O15118 1278 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 PJA2O43164 708 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 ATP5BP06576 529 aaKnown RBP30.39■■■□□ 2.46
HOXB3-208ENST00000476342 RHOCP08134 193 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 POLR2EP19388 210 aaKnown RBP30.39■■■□□ 2.46
HOXB3-208ENST00000476342 HOXC13P31276 330 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 CCR3P51677 355 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 TPI1P60174 286 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 CA9Q16790 459 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 PLEKHG6Q3KR16 790 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 EMC10Q5UCC4 262 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 TMEM215Q68D42 235 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 MBLAC2Q68D91 279 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 ADIPOR2Q86V24 386 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 HSPH1Q92598 858 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 CATSPERBQ9H7T0 1116 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 NEU3Q9UQ49 428 aa30.39■■■□□ 2.46
HOXB3-208ENST00000476342 FGF10O15520 208 aaPredicted RBP30.39■■■□□ 2.45
HOXB3-208ENST00000476342 RARAP10276 462 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 CSKP41240 450 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 SLC1A1P43005 524 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 KIF5AQ12840 1032 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 DPYSL2Q16555 572 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 FUT11Q495W5 492 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 PPP6R3Q5H9R7 873 aaPredicted RBP30.39■■■□□ 2.45
HOXB3-208ENST00000476342 PITRM1Q5JRX3 1037 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 EGFLAMQ63HQ2 1017 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 PKN3Q6P5Z2 889 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 C1orf210Q8IVY1 113 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 IL17RCQ8NAC3 791 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 KCTD15Q96SI1 283 aaPredicted RBP30.39■■■□□ 2.45
HOXB3-208ENST00000476342 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.39■■■□□ 2.45
HOXB3-208ENST00000476342 TMEM248Q9NWD8 314 aa30.39■■■□□ 2.45
HOXB3-208ENST00000476342 EEF2KO00418 725 aaKnown RBP30.38■■■□□ 2.45
HOXB3-208ENST00000476342 LAMTOR5O43504 91 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 KRT7P08729 469 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 HNRNPLP14866 589 aaKnown RBP eCLIP30.38■■■□□ 2.45
HOXB3-208ENST00000476342 MAPKAPK2P49137 400 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 CHPFQ8IZ52 775 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 ALLCQ8N6M5 410 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 PDLIM2Q96JY6 352 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 PRRX2Q99811 253 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 MUC3BQ9H195 1237 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 DONSONQ9NYP3 566 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 ZNF212Q9UDV6 495 aa30.38■■■□□ 2.45
HOXB3-208ENST00000476342 INTS6Q9UL03 887 aaKnown RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms