RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TMA16Q96EY4 203 aaKnown RBP14.51□□□□□ -0.09
FAM3A-218ENST00000475657 CYFIP2Q96F07 1278 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 IRX2Q9BZI1 471 aaPredicted RBP14.51□□□□□ -0.09
FAM3A-218ENST00000475657 UBE4BO95155 1302 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 PVALEFA0A1B0GWK0 134 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 A0A1W2PP55 124 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 SLC12A8A0AV02 714 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 LRRIQ3A6PVS8 624 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 MID1O15344 667 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 KLRC4O43908 158 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 RNASEH2AO75792 299 aaKnown RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 LATS1O95835 1130 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 C4BPAP04003 597 aaKnown RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 RPN1P04843 607 aaKnown RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 CKMT1AP12532 417 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 POLR2EP19388 210 aaKnown RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 DAB2P98082 770 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 SGSM1Q2NKQ1 1148 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 HNRNPA1L2Q32P51 320 aaKnown RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 MPP7Q5T2T1 576 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 CCDC81Q6ZN84 652 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 C12orf56Q8IXR9 622 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 SLC25A45Q8N413 288 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 ZNF557Q8N988 423 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-218ENST00000475657 KIAA0895Q8NCT3 520 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 OR4C6Q8NH72 309 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 TAF4BQ92750 862 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 JAKMIP2Q96AA8 810 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 MYO19Q96H55 970 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 OMDQ99983 421 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 STARD5Q9NSY2 213 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 TJP2Q9UDY2 1190 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 HMGXB4Q9UGU5 601 aa14.5□□□□□ -0.09
FAM3A-218ENST00000475657 SIN3BO75182 1162 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 CSO75390 466 aaKnown RBP14.49□□□□□ -0.09
FAM3A-218ENST00000475657 VNN1O95497 513 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 GOT1P17174 413 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 SLC8A1P32418 973 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 HARS2P49590 506 aaKnown RBP14.49□□□□□ -0.09
FAM3A-218ENST00000475657 INCA1Q0VD86 236 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 CAMK4Q16566 473 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 ARL13BQ3SXY8 428 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 HS1BP3Q53T59 392 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 ADGRF1Q5T601 910 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 RBM43Q6ZSC3 357 aaKnown RBP14.49□□□□□ -0.09
FAM3A-218ENST00000475657 RSRC2Q7L4I2 434 aaKnown RBP14.49□□□□□ -0.09
FAM3A-218ENST00000475657 EXD3Q8N9H8 876 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 PARD3BQ8TEW8 1205 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 TTC17Q96AE7 1141 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 SLC46A1Q96NT5 459 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 DUSP16Q9BY84 665 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 TRIM4Q9C037 500 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 CGNQ9P2M7 1197 aaKnown RBP14.49□□□□□ -0.09
FAM3A-218ENST00000475657 ANKMY1Q9P2S6 941 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 DMTF1Q9Y222 760 aa14.49□□□□□ -0.09
FAM3A-218ENST00000475657 TARSL2A2RTX5 802 aaKnown RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SUV39H1O43463 412 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 LETM1O95202 739 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SMC2O95347 1197 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 AFPP02771 609 aaKnown RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 ASLP04424 464 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 RBMS1P29558 406 aaKnown RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 MLLT3P42568 568 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 ADPRHP54922 357 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 ST8SIA6P61647 398 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 DPYDQ12882 1025 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SGO2Q562F6 1265 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 C9orf64Q5T6V5 341 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 CEP135Q66GS9 1140 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SPOPLQ6IQ16 392 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 PRPF39Q86UA1 669 aaKnown RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 SPATA20Q8TB22 786 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 NT5C1AQ9BXI3 368 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 KDM4CQ9H3R0 1056 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 MTG2Q9H4K7 406 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 USP29Q9HBJ7 922 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 EXOC1Q9NV70 894 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 HBS1LQ9Y450 684 aaKnown RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 PCDHGA8Q9Y5G5 932 aa14.48□□□□□ -0.09
FAM3A-218ENST00000475657 USP9YO00507 2555 aaPredicted RBP14.48□□□□□ -0.09
FAM3A-218ENST00000475657 A0A1B0GVM2 712 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
FAM3A-218ENST00000475657 GP1BBP13224 206 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 KRT10P13645 584 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 C5AR1P21730 350 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 DGKAP23743 735 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 ASPAP45381 313 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 PNOCQ13519 176 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 ISXQ2M1V0 245 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 MMAAQ8IVH4 418 aaKnown RBP14.47□□□□□ -0.09
FAM3A-218ENST00000475657 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 FAM131CQ96AQ9 280 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 LMLNQ96KR4 655 aa14.47□□□□□ -0.09
FAM3A-218ENST00000475657 GSDMAQ96QA5 445 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms