RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PCK1P35558 622 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 LBX1P52954 281 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 HNRNPDQ14103 355 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF792Q3KQV3 632 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC8BQ6P9F7 803 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TXNDC11Q6PKC3 985 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C16orf89Q6UX73 402 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C3orf67Q6ZVT6 689 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ARPINQ7Z6K5 226 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 DCP2Q8IU60 420 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC60Q8IWA6 550 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM145Q8NBT3 493 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RIN3Q8TB24 985 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 UBA3Q8TBC4 463 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 MYLPFQ96A32 169 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF668Q96K58 619 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ART5Q96L15 291 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF670Q9BS34 389 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PI4K2AQ9BTU6 479 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 NUSAP1Q9BXS6 441 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 IL17RBQ9NRM6 502 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RBM22Q9NW64 420 aaKnown RBP eCLIP4.72□□□□□ -1.657e-6■■■■□ 24.6
CCNL1-215ENST00000474539 SYBUQ9NX95 663 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 EFR3BQ9Y2G0 817 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ATP8A1Q9Y2Q0 1164 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 HCN4Q9Y3Q4 1203 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 DTNAQ9Y4J8 743 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PCDHA3Q9Y5H8 950 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 A0A1W2PQ45 241 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 A0A1W2PQY0 241 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 OR5K4A6NMS3 321 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CFLARO15519 480 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SOX30O94993 753 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RASGRP1O95267 797 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SOD2P04179 222 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C8AP07357 584 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ENO3P13929 434 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ATP6V1C1P21283 382 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GRK2P25098 689 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 HPCAL1P37235 193 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CDK7P50613 346 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ATP1A2P50993 1020 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ADIGQ0VDE8 80 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CRY1Q16526 586 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PARP6Q2NL67 630 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PRAMEF19Q5SWL8 479 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GRTP1Q5TC63 336 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PRMT9Q6P2P2 845 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C1orf186Q6ZWK4 172 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ILDR2Q71H61 639 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 EPM2AIP1Q7L775 607 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 CLEC10AQ8IUN9 316 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 GRAMD1CQ8IYS0 662 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 OR6C4Q8NGE1 309 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SLC35G2Q8TBE7 412 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 PIP4K2CQ8TBX8 421 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 NAF1Q96HR8 494 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 ABHD8Q96I13 439 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 KAZALD1Q96I82 304 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 FAM83CQ9BQN1 747 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RTP3Q9BQQ7 232 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 FAM126AQ9BYI3 521 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 TASP1Q9H6P5 420 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 SMURF2Q9HAU4 748 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 WHRNQ9P202 907 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 C19orf25Q9UFG5 118 aaPredicted RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 XPO7Q9UIA9 1087 aaKnown RBP4.72□□□□□ -1.65
CCNL1-215ENST00000474539 RNF112Q9ULX5 631 aa4.72□□□□□ -1.65
CCNL1-215ENST00000474539 EDDM13A0A1B0GTR0 161 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC160A6NGH7 325 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 TLR5O60602 858 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 MICAL2O94851 1124 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 LDOC1O95751 146 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 TIMP1P01033 207 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 PPIBP23284 216 aaKnown RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 DGKGP49619 791 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 PEX5P50542 639 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 GUCY2FP51841 1108 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 PTPN5P54829 565 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 KCNK10P57789 538 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 ACTN3Q08043 901 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 MAPK8IP2Q13387 824 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 KLHL26Q53HC5 615 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 C9orf57Q5W0N0 161 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 MFSD5Q6N075 450 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 KCNT2Q6UVM3 1135 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 R3HCC1LQ7Z5L2 792 aaKnown RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 FAM35AQ86V20 835 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 AHI1Q8N157 1196 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 MPP5Q8N3R9 675 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 TTLQ8NG68 377 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 WDR48Q8TAF3 677 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 RXFP2Q8WXD0 754 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 EXT2Q93063 718 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 GFM2Q969S9 779 aaKnown RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 BTBD6Q96KE9 485 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 MFSD14AQ96MC6 490 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms