RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PLEKHG4BQ96PX9 1271 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 SNX18Q96RF0 628 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 NPLQ9BXD5 320 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-212ENST00000473961 FSD1LQ9BXM9 530 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 TRIM31Q9BZY9 425 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 LMAN2LQ9H0V9 348 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 SERTAD4Q9NUC0 356 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 ABHD10Q9NUJ1 306 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 KCND2Q9NZV8 630 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 DKK3Q9UBP4 350 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 MAFFQ9ULX9 164 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 ADAMTS5Q9UNA0 930 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CAMK2AQ9UQM7 478 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 HS3ST3A1Q9Y663 406 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 SPATA31A1Q5TZJ5 1347 aa4.63□□□□□ -1.67
BRCA1-212ENST00000473961 CENPVL1A0A0U1RR11 272 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 A6NCN8 305 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TMEM247A6NEH6 219 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 C16orf96A6NNT2 1141 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 M0QZQ0 153 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 AP3D1O14617 1153 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 SYN3O14994 580 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TMCC2O75069 709 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TSPAN9O75954 239 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 EBLN1P0CF75 366 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 GSTM2P28161 218 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 GGT5P36269 586 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 WDR5P61964 334 aaKnown RBP4.62□□□□□ -1.67
BRCA1-212ENST00000473961 GPC5P78333 572 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TAP1Q03518 808 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 LMAN2Q12907 356 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 MEA1Q16626 185 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 AARS2Q5JTZ9 985 aaKnown RBP4.62□□□□□ -1.67
BRCA1-212ENST00000473961 KIAA0895LQ68EN5 471 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 KIRREL2Q6UWL6 708 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 Q6ZNX1 250 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 GALNT7Q86SF2 657 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 PALM2Q8IXS6 379 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 LAS2Q8IYD9 372 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TFAP2BQ92481 460 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TBC1D5Q92609 795 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 HIC2Q96JB3 615 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 ELOVL1Q9BW60 279 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 MROH8Q9H579 483 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 TTC12Q9H892 705 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-212ENST00000473961 HAUS2Q9NVX0 235 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 MPP6Q9NZW5 540 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 VPS28Q9UK41 221 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 FZD4Q9ULV1 537 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 RPS6KL1Q9Y6S9 549 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 DCAF1Q9Y4B6 1507 aa4.62□□□□□ -1.67
BRCA1-212ENST00000473961 B4DLN1 442 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 TEX22C9J3V5 150 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 H3BNC9 293 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 ZNF500O60304 480 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 UBL4AP11441 157 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 ABCD1P33897 745 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 BSGP35613 385 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 GRIA3P42263 894 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 EIF3BP55884 814 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 MRPS35P82673 323 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 ARHGAP8P85298 464 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 GOLGA8DPQ0D2H9 430 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 CUL4AQ13619 759 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 PRICKLE4Q2TBC4 344 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 RILPL1Q5EBL4 403 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 ZNF766Q5HY98 468 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 PCID2Q5JVF3 399 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 CFAP58Q5T655 872 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 FAM205BPQ63HN1 556 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 H1FNTQ75WM6 255 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 SLC29A4Q7RTT9 530 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 METTL6Q8TCB7 284 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 EXTL1Q92935 676 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 RSRC1Q96IZ7 334 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 COQ10AQ96MF6 247 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 LENG8Q96PV6 779 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 FYTTD1Q96QD9 318 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 PHF7Q9BWX1 381 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 RANBP17Q9H2T7 1088 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 CYP4F11Q9HBI6 524 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 DLL3Q9NYJ7 618 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 BCCIPQ9P287 314 aaKnown RBP eCLIP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 ANKFY1Q9P2R3 1169 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 SLC25A10Q9UBX3 287 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 KLQ9UEF7 1012 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 SARDHQ9UL12 918 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 RCE1Q9Y256 329 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 REXO2Q9Y3B8 237 aaKnown RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 LYVE1Q9Y5Y7 322 aa4.61□□□□□ -1.67
BRCA1-212ENST00000473961 SIRT4Q9Y6E7 314 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-212ENST00000473961 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 STRNO43815 780 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 PRAMEF2O60811 474 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 USP12O75317 370 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 SEC14L2O76054 403 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 HLA-DQA2P01906 255 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms