RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 FBXL13Q8NEE6 735 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 OR14C36Q8NHC7 312 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 GOLGA1Q92805 767 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 OMDQ99983 421 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 HPSEQ9Y251 543 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 RNF103O00237 685 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 LATO43561 262 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 C1SP09871 688 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 CD19P15391 556 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 GLDCP23378 1020 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 RXRGP48443 463 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 MXI1P50539 228 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 CCR5P51681 352 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 TBX4P57082 545 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 CXADRP78310 365 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 DPYDQ12882 1025 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 LRMPQ12912 555 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-209ENST00000473421 KDM7AQ6ZMT4 941 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 LRRC69Q6ZNQ3 347 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 ZNF605Q86T29 641 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 SLC35F5Q8WV83 523 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 KCTD13Q8WZ19 329 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 FGF11Q92914 225 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 KAT5Q92993 513 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 SARDHQ9UL12 918 aa13.07□□□□□ -0.32
TRAF4-209ENST00000473421 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 RRP8O43159 456 aaKnown RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 GOT1P17174 413 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 CKMT2P17540 419 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 GTF2H1P32780 548 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 NDUFA8P51970 172 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 ZNF445P59923 1031 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 CUL2Q13617 745 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 MS4A13Q5J8X5 152 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 SYPL2Q5VXT5 272 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 CIR1Q86X95 450 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 SIX6OS1Q8N1H7 587 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 DCBLD1Q8N8Z6 715 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 ENGASEQ8NFI3 743 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 DQX1Q8TE96 717 aaKnown RBP13.06□□□□□ -0.32
TRAF4-209ENST00000473421 RFFLQ8WZ73 363 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 SCML1Q9UN30 329 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 A0A1W2PNU3 283 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 MOCS2O96007 188 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 LTFP02788 710 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 MPOP05164 745 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 SLC11A2P49281 568 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 PMS1P54277 932 aaKnown RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 CFHR1Q03591 330 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 ENPEPQ07075 957 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 KCNH2Q12809 1159 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D25Q3MII6 688 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 SCML4Q8N228 414 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
TRAF4-209ENST00000473421 OR52K2Q8NGK3 314 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 FRS2Q8WU20 508 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 KLK6Q92876 244 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 MIS12Q9H081 205 aa13.05□□□□□ -0.32
TRAF4-209ENST00000473421 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms