RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ASPMQ8IZT6 3477 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ADAMTS9Q9P2N4 1935 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 KCNU1A8MYU2 1149 aa14□□□□□ -0.17
CHD3-209ENST00000473376 SLC7A4O43246 635 aa14□□□□□ -0.17
CHD3-209ENST00000473376 TRUB2O95900 331 aaKnown RBP14□□□□□ -0.17
CHD3-209ENST00000473376 IGHV4-34P06331 123 aa14□□□□□ -0.17
CHD3-209ENST00000473376 GALCP54803 685 aa14□□□□□ -0.17
CHD3-209ENST00000473376 EFHC1Q5JVL4 640 aa14□□□□□ -0.17
CHD3-209ENST00000473376 SYPL2Q5VXT5 272 aa14□□□□□ -0.17
CHD3-209ENST00000473376 KLHL10Q6JEL2 608 aa14□□□□□ -0.17
CHD3-209ENST00000473376 TRIM65Q6PJ69 517 aa14□□□□□ -0.17
CHD3-209ENST00000473376 SLCO6A1Q86UG4 719 aa14□□□□□ -0.17
CHD3-209ENST00000473376 TAC4Q86UU9 113 aa14□□□□□ -0.17
CHD3-209ENST00000473376 CARNMT1Q8N4J0 409 aa14□□□□□ -0.17
CHD3-209ENST00000473376 ATP6V0D2Q8N8Y2 350 aa14□□□□□ -0.17
CHD3-209ENST00000473376 SRRTQ9BXP5 876 aaKnown RBP14□□□□□ -0.17
CHD3-209ENST00000473376 ACE2Q9BYF1 805 aaPredicted RBP14□□□□□ -0.17
CHD3-209ENST00000473376 NUCKS1Q9H1E3 243 aaKnown RBP14□□□□□ -0.17
CHD3-209ENST00000473376 UBE2TQ9NPD8 197 aaPredicted RBP14□□□□□ -0.17
CHD3-209ENST00000473376 ST7Q9NRC1 585 aa14□□□□□ -0.17
CHD3-209ENST00000473376 STIM2Q9P246 746 aa14□□□□□ -0.17
CHD3-209ENST00000473376 PCDHGC3Q9UN70 934 aa14□□□□□ -0.17
CHD3-209ENST00000473376 PCDHGA1Q9Y5H4 931 aa14□□□□□ -0.17
CHD3-209ENST00000473376 SNX11Q9Y5W9 270 aa14□□□□□ -0.17
CHD3-209ENST00000473376 AKAP13Q12802 2813 aa14□□□□□ -0.17
CHD3-209ENST00000473376 DMXL2Q8TDJ6 3036 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 PKD1L2Q7Z442 2459 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 A0A1B0GVM2 712 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 TCAF2A6NFQ2 919 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 F5H5T6 163 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 HSF2BPO75031 334 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 SIN3BO75182 1162 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 FSBPO95073 299 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 C1SP09871 688 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 KRT5P13647 590 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 GOT1P17174 413 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 TACR2P21452 398 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 GNA15P30679 374 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 CCR1P32246 355 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 SCAPQ12770 1279 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 OVGP1Q12889 678 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 FSCBQ5H9T9 825 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 RABGAP1LQ5R372 815 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 RNF219Q5W0B1 726 aaPredicted RBP13.99□□□□□ -0.17
CHD3-209ENST00000473376 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 DSG4Q86SJ6 1040 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 ZNF366Q8N895 744 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 SNX19Q92543 992 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 NOX5Q96PH1 765 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 SLC2A13Q96QE2 648 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 FAM129BQ96TA1 746 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 PRMT1Q99873 361 aaKnown RBP13.99□□□□□ -0.17
CHD3-209ENST00000473376 CCDC86Q9H6F5 360 aaKnown RBP13.99□□□□□ -0.17
CHD3-209ENST00000473376 ERVMER34-1Q9H9K5 563 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 RRN3Q9NYV6 651 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 APEX2Q9UBZ4 518 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 RWDD2AQ9UIY3 292 aa13.99□□□□□ -0.17
CHD3-209ENST00000473376 A0A1B0GTQ1 180 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 E5RJQ4 531 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 TAF4O00268 1085 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 PIK3R2O00459 728 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 ALOX15BO15296 676 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 LATO43561 262 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
CHD3-209ENST00000473376 ABCB4P21439 1286 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SLC8A1P32418 973 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 C21orf59P57076 290 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 CDK17Q00537 523 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 PDCLQ13371 301 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SMAD1Q15797 465 aaKnown RBP13.98□□□□□ -0.17
CHD3-209ENST00000473376 C5orf22Q49AR2 442 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SLC45A4Q5BKX6 768 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 ZC3H12AQ5D1E8 599 aaKnown RBP13.98□□□□□ -0.17
CHD3-209ENST00000473376 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 DENND1BQ6P3S1 775 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHD3-209ENST00000473376 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
CHD3-209ENST00000473376 IQCHQ86VS3 1027 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 CACUL1Q86Y37 369 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 ZDHHC17Q8IUH5 632 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 LGI2Q8N0V4 545 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 OXR1Q8N573 874 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 ZNF397Q8NF99 534 aaPredicted RBP13.98□□□□□ -0.17
CHD3-209ENST00000473376 SHC3Q92529 594 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 PTPRN2Q92932 1015 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SPAG5Q96R06 1193 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 OMDQ99983 421 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 NEUROG2Q9H2A3 272 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 CTNND2Q9UQB3 1225 aa13.98□□□□□ -0.17
CHD3-209ENST00000473376 SPEGQ15772 3267 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 MID1O15344 667 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 THAP12O43422 761 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 MAGEC1O60732 1142 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 CD38P28907 300 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 RXRGP48443 463 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 FAM46CQ5VWP2 391 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 NCEH1Q6PIU2 408 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 GBP6Q6ZN66 633 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 CHSY1Q86X52 802 aa13.97□□□□□ -0.17
CHD3-209ENST00000473376 MMAAQ8IVH4 418 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms