RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 BIRC7Q96CA5 298 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 ORAI3Q9BRQ5 295 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 PIGVQ9NUD9 493 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 ASNSD1Q9NWL6 643 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 KIAA1522Q9P206 1035 aaPredicted RBP17.22■□□□□ 0.35
USP40-212ENST00000473191 SUN2Q9UH99 717 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.22■□□□□ 0.35
USP40-212ENST00000473191 HS3ST4Q9Y661 456 aa17.22■□□□□ 0.35
USP40-212ENST00000473191 PLXNA2O75051 1894 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 F5H5T6 163 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 M0QYT0 321 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 PES1O00541 588 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 MID1O15344 667 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 DAB1O75553 588 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 ADCY5O95622 1261 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 SEMA4FO95754 770 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 DNTTP04053 509 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 GLI1P08151 1106 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 SYPP08247 313 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 CCR1P32246 355 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 CSNK1EP49674 416 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 RNASE9P60153 205 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 AUHQ13825 339 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 E2F5Q15329 346 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 ST3GAL2Q16842 350 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 ZNF776Q68DI1 518 aaPredicted RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 SLC26A9Q7LBE3 791 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 RABEPKQ7Z6M1 372 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 NOP9Q86U38 636 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 FAM114A1Q8IWE2 563 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 STK40Q8N2I9 435 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 PTPRN2Q92932 1015 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 RNF34Q969K3 372 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 ALG14Q96F25 216 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 FAM129BQ96TA1 746 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 TRIM62Q9BVG3 475 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 TMEM121BQ9BXQ6 578 aaPredicted RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
USP40-212ENST00000473191 EBF2Q9HAK2 575 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 SUSD2Q9UGT4 822 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
USP40-212ENST00000473191 TMEM131Q92545 1883 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 A0A1W2PP55 124 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 FAM47DPA6NHR8 397 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 UPK3BL1B0FP48 263 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 UPK3BL2E5RIL1 263 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 PLK4O00444 970 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 KCNK3O14649 394 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 EPHB6O15197 1021 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 HYAL3O43820 417 aaPredicted RBP17.2■□□□□ 0.34
USP40-212ENST00000473191 PAGE1O75459 146 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 FSBPO95073 299 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 ASLP04424 464 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 IGHV4-34P06331 123 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 MMEP08473 750 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 UCHL3P15374 230 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 ABCB4P21439 1286 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 CDH5P33151 784 aaPredicted RBP17.2■□□□□ 0.34
USP40-212ENST00000473191 ST8SIA6P61647 398 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 RAB6CQ53S08 254 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 ARTNQ5T4W7 220 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 AADATQ8N5Z0 425 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 SLC20A1Q8WUM9 679 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 NPY6RQ99463 290 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 SCNM1Q9BWG6 230 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 RAB6CQ9H0N0 254 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 VPS16Q9H269 839 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 NEUROG2Q9H2A3 272 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 FNDC3AQ9Y2H6 1198 aaKnown RBP17.2■□□□□ 0.34
USP40-212ENST00000473191 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
USP40-212ENST00000473191 CNTN5O94779 1100 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 NOS2P35228 1153 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 CST6Q15828 149 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 ALFQ53S48 1182 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 XYLT1Q86Y38 959 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 ZNF557Q8N988 423 aaPredicted RBP17.19■□□□□ 0.34
USP40-212ENST00000473191 ZNF397Q8NF99 534 aaPredicted RBP17.19■□□□□ 0.34
USP40-212ENST00000473191 CPA5Q8WXQ8 436 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
USP40-212ENST00000473191 TBCBQ99426 244 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 SIK2Q9H0K1 926 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 GANQ9H2C0 597 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 GAREM1Q9H706 876 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 SYNCQ9H7C4 482 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 TM9SF3Q9HD45 589 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 FBXL12Q9NXK8 326 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 SNX11Q9Y5W9 270 aa17.19■□□□□ 0.34
USP40-212ENST00000473191 F8VZ95 297 aa17.18■□□□□ 0.34
USP40-212ENST00000473191 WNT9AO14904 365 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms