RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PLA2G4CQ9UP65 541 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 MAPK8IP1Q9UQF2 711 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 UBR5O95071 2799 aaPredicted RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 TTC34A8MYJ7 566 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 MID1O15344 667 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 IGLV3-27P01718 113 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 ARRB1P49407 418 aaPredicted RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 METAP1P53582 386 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 ZBTB16Q05516 673 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 VAC14Q08AM6 782 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 PKP1Q13835 747 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 PROX2Q3B8N5 592 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 TTC31Q49AM3 519 aaPredicted RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 C9orf64Q5T6V5 341 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 KDM7AQ6ZMT4 941 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 RSRC2Q7L4I2 434 aaKnown RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 LSMEM2Q8N112 164 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 CACTIN-AS1Q8N1I8 211 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 AADATQ8N5Z0 425 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 ARID1BQ8NFD5 2236 aaPredicted RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 GANCQ8TET4 914 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 KCNE4Q8WWG9 221 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 FBXL12Q9NXK8 326 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 ADAMTS1Q9UHI8 967 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 SLCO3A1Q9UIG8 710 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 STRIP2Q9ULQ0 834 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
VCL-204ENST00000472585 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
VCL-204ENST00000472585 AHCTF1Q8WYP5 2266 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 A0A1B0GVL5 298 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 A0A1W2PP55 124 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 PIK3R2O00459 728 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 KLK10O43240 276 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 TBL1XO60907 577 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 CALCAP01258 141 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 FYNP06241 537 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 CKMT2P17540 419 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 NR2F2P24468 414 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 ME1P48163 572 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 HARS2P49590 506 aaKnown RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 RPS24P62847 133 aaKnown RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 ADIGQ0VDE8 80 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 NFIL3Q16649 462 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 GOLGA7BQ2TAP0 167 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 HNRNPA1L2Q32P51 320 aaKnown RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 ZNF776Q68DI1 518 aaPredicted RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 MMAAQ8IVH4 418 aaKnown RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 ARHGAP18Q8N392 663 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 UBR7Q8N806 425 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 WFIKKN2Q8TEU8 576 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 CLEC4CQ8WTT0 213 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 TFAP2BQ92481 460 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 TTC9Q92623 222 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 PRICKLE1Q96MT3 831 aaPredicted RBP9.68□□□□□ -0.86
VCL-204ENST00000472585 DPH1Q9BZG8 443 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 GDF3Q9NR23 364 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 AASDHPPTQ9NRN7 309 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 ARHGAP20Q9P2F6 1191 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 SUN2Q9UH99 717 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 TSPAN16Q9UKR8 245 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 FRMD4BQ9Y2L6 1034 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 FLNCQ14315 2725 aa9.68□□□□□ -0.86
VCL-204ENST00000472585 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 XPO1O14980 1071 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 MT-CO3P00414 261 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 VAV1P15498 845 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 POLR2EP19388 210 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 CD38P28907 300 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 EPHA8P29322 1005 aaPredicted RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 PSMC2P35998 433 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 CSKP41240 450 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 NUMBP49757 651 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 NXPH1P58417 271 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 DAOAP59103 153 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 PPP2CBP62714 309 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 PPP2CAP67775 309 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 E2F1Q01094 437 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 DNM1Q05193 864 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 ADAM9Q13443 819 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 CBWD6Q4V339 395 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 HS1BP3Q53T59 392 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 SLC45A4Q5BKX6 768 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 CBWD3Q5JTY5 395 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 COLEC12Q5KU26 742 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 CBWD5Q5RIA9 395 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 SFMBT2Q5VUG0 894 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 KRT39Q6A163 491 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 INTS8Q75QN2 995 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 FAM186BQ8IYM0 893 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms