RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 C1QL1O75973 258 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 GFPT2O94808 682 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 MYBP10242 640 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 CTSAP10619 480 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 PLA2G2AP14555 144 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 RPS6KB1P23443 525 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 TSPAN7P41732 249 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 RPS9P46781 194 aaKnown RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 LSSP48449 732 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 TDO2P48775 406 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 METAP2P50579 478 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 MECP2P51608 486 aaKnown RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 SESN3P58005 492 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 FAM189BP81408 668 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 IRF9Q00978 393 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 WASHC5Q12768 1159 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 USP39Q53GS9 565 aaKnown RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 ZBTB41Q5SVQ8 909 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 KCNV1Q6PIU1 500 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 PARM1Q6UWI2 310 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 SLC24A5Q71RS6 500 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 BCL6BQ8N143 479 aaPredicted RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 FAM156AQ8NDB6 213 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 CMASQ8NFW8 434 aaPredicted RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 CALML6Q8TD86 181 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 NUDT16L1Q9BRJ7 211 aaKnown RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 BOCQ9BWV1 1114 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 TMEM117Q9H0C3 514 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 ARRDC1-AS1Q9H2J1 176 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 KLK13Q9UKR3 277 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 ZNF215Q9UL58 517 aaPredicted RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 ZKSCAN5Q9Y2L8 839 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 CRYL1Q9Y2S2 319 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 NOC2LQ9Y3T9 749 aaKnown RBP7.41□□□□□ -1.22
SCAF4-205ENST00000472318 ZNF462Q96JM2 2506 aa7.41□□□□□ -1.22
SCAF4-205ENST00000472318 MYH7BA7E2Y1 1941 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 NBPF19A0A087WUL8 3843 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 CCDC195A0A1B0GUA6 201 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA12O60330 932 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 RFPL2O75678 378 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 ZNF806P0C7X5 589 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 HSPD1P10809 573 aaKnown RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PDHBP11177 359 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 MARK3P27448 753 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 HOXC13P31276 330 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 FNTBP49356 437 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 STAT5BP51692 787 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 HMGA2P52926 109 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 ROR1Q01973 937 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 TROAPQ12815 778 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 SNX32Q86XE0 403 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 GPR135Q8IZ08 494 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 LRRC43Q8N309 656 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 STAMQ92783 540 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 ATP6V1E2Q96A05 226 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 TBC1D20Q96BZ9 403 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 ZNF707Q96C28 371 aaPredicted RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 FOXRED1Q96CU9 486 aaPredicted RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 UBXN10Q96LJ8 280 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 KLHL5Q96PQ7 755 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 FOXB1Q99853 325 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 TMEM47Q9BQJ4 181 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 EMC7Q9NPA0 242 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 C14orf119Q9NWQ9 140 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 TMEM161AQ9NX61 479 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 EXOC6BQ9Y2D4 811 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGB6Q9Y5F9 930 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA9Q9Y5G4 932 aaKnown RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA8Q9Y5G5 932 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA7Q9Y5G6 932 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA6Q9Y5G7 932 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PCDHGA3Q9Y5H0 932 aa7.4□□□□□ -1.22
SCAF4-205ENST00000472318 MAGED1Q9Y5V3 778 aaPredicted RBP7.4□□□□□ -1.22
SCAF4-205ENST00000472318 PIEZO2Q9H5I5 2752 aa7.4□□□□□ -1.23
SCAF4-205ENST00000472318 COL12A1Q99715 3063 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 TEX15Q9BXT5 2789 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 ABCB11O95342 1321 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 DENND3A2RUS2 1198 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 RRN3P2A6NIE6 340 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 TSPY2A6NKD2 308 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
SCAF4-205ENST00000472318 KRT20P35900 424 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 BCAR1P56945 870 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 SATB1Q01826 763 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 ALDH6A1Q02252 535 aaKnown RBP7.39□□□□□ -1.23
SCAF4-205ENST00000472318 SP4Q02446 784 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 ZNF543Q08ER8 600 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 FOXL1Q12952 345 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 PGM5Q15124 567 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 NRN1LQ496H8 165 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 CCDC38Q502W7 563 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 CLLU1OSQ5K130 101 aa7.39□□□□□ -1.23
SCAF4-205ENST00000472318 DGKKQ5KSL6 1271 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms