RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FAM133BQ5BKY9 247 aaKnown RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 KIAA1614Q5VZ46 1190 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 ARHGAP17Q68EM7 881 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 INO80CQ6PI98 192 aaPredicted RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 PRICKLE2Q7Z3G6 844 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 TAS1R2Q8TE23 839 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 MAGEF1Q9HAY2 307 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 STIM2Q9P246 746 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 IL17BQ9UHF5 180 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 ERVW-1Q9UQF0 538 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 DMTF1Q9Y222 760 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 ITIH6Q6UXX5 1313 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 CKMT1AP12532 417 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 DGKAP23743 735 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 STAT4Q14765 748 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 IGF2-ASQ6U949 168 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.7■□□□□ 0.74
SORT1-203ENST00000471996 STK40Q8N2I9 435 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 SLC4A11Q8NBS3 891 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.7■□□□□ 0.74
SORT1-203ENST00000471996 KDM4CQ9H3R0 1056 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 LRRC4Q9HBW1 653 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 CYTH4Q9UIA0 394 aa19.7■□□□□ 0.74
SORT1-203ENST00000471996 A0A1B0GVM2 712 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 YJEFN3A6XGL0 299 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 E7ENQ6 273 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 TULP2O00295 520 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 NR3C1P04150 777 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 MAT2AP31153 395 aaKnown RBP19.69■□□□□ 0.74
SORT1-203ENST00000471996 DRD3P35462 400 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 CTSOP43234 321 aaPredicted RBP19.69■□□□□ 0.74
SORT1-203ENST00000471996 GCLMP48507 274 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 SLC11A2P49281 568 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 VAMP7P51809 220 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 CUL4BQ13620 913 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 STK38Q15208 465 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 KMT5BQ4FZB7 885 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 CEP135Q66GS9 1140 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 TMC6Q7Z403 805 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 UNC45BQ8IWX7 931 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 HJURPQ8NCD3 748 aaPredicted RBP19.69■□□□□ 0.74
SORT1-203ENST00000471996 LINC00301Q8NCQ3 95 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 CCDC150Q8NCX0 1101 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 FAM131CQ96AQ9 280 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 IPO9Q96P70 1041 aaKnown RBP19.69■□□□□ 0.74
SORT1-203ENST00000471996 KCTD10Q9H3F6 313 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 ABCC13Q9NSE7 274 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 PPP4R2Q9NY27 417 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 SLCO3A1Q9UIG8 710 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 FRMD4BQ9Y2L6 1034 aa19.69■□□□□ 0.74
SORT1-203ENST00000471996 XPO1O14980 1071 aaKnown RBP19.68■□□□□ 0.74
SORT1-203ENST00000471996 ACSL4O60488 711 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 IL1BP01584 269 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 IGLV3-27P01718 113 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 GP1BAP07359 652 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 MZF1P28698 734 aaPredicted RBP19.68■□□□□ 0.74
SORT1-203ENST00000471996 RAD23BP54727 409 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 SKOR1P84550 965 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 STK4Q13043 487 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 ELAVL3Q14576 367 aaKnown RBP19.68■□□□□ 0.74
SORT1-203ENST00000471996 C8orf34Q49A92 452 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 PITRM1Q5JRX3 1037 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 NUGGCQ68CJ6 796 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 TTC39CQ8N584 583 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 PTPRN2Q92932 1015 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 AZIN2Q96A70 460 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 PRICKLE1Q96MT3 831 aaPredicted RBP19.68■□□□□ 0.74
SORT1-203ENST00000471996 UCKL1Q9NWZ5 548 aa19.68■□□□□ 0.74
SORT1-203ENST00000471996 PRAMEF26H0Y7S4 382 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 PDXKO00764 312 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 SPTLC2O15270 562 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 FFAR2O15552 330 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 PLRG1O43660 514 aaKnown RBP19.67■□□□□ 0.74
SORT1-203ENST00000471996 LZTS3O60299 673 aaPredicted RBP19.67■□□□□ 0.74
SORT1-203ENST00000471996 PPP6R2O75170 966 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 GIMD1P0DJR0 217 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 SYT1P21579 422 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 ECT2LQ008S8 904 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 PPP3CAQ08209 521 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 ADIGQ0VDE8 80 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 FSCBQ5H9T9 825 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 NADSYN1Q6IA69 706 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 MSANTD2Q6P1R3 559 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 SHC4Q6S5L8 630 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 MMS22LQ6ZRQ5 1243 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 TRIM69Q86WT6 500 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 CARNMT1Q8N4J0 409 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 KIAA0895Q8NCT3 520 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 CCDC97Q96F63 343 aaPredicted RBP19.67■□□□□ 0.74
SORT1-203ENST00000471996 KLHDC7BQ96G42 594 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 SLC46A1Q96NT5 459 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 TRIM4Q9C037 500 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 FAM117AQ9C073 453 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 ABCG4Q9H172 646 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 CISHQ9NSE2 258 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 KLHL11Q9NVR0 708 aa19.67■□□□□ 0.74
SORT1-203ENST00000471996 HEMK1Q9Y5R4 338 aaPredicted RBP19.67■□□□□ 0.74
SORT1-203ENST00000471996 TYW5A2RUC4 315 aaKnown RBP19.66■□□□□ 0.74
SORT1-203ENST00000471996 MAPK13O15264 365 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 POLR2DO15514 142 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms