RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ECI2O75521 394 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 TJP3O95049 919 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 TNK2Q07912 1038 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 FYB2Q5VWT5 728 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 LRRN4Q8WUT4 740 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 IRF7Q92985 503 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 CELF6Q96J87 481 aaKnown RBP19.75■□□□□ 0.75
PSPC1-203ENST00000471658 FAM83CQ9BQN1 747 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 TMEM248Q9NWD8 314 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 HEY1Q9Y5J3 304 aa19.75■□□□□ 0.75
PSPC1-203ENST00000471658 OTOL1A6NHN0 477 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-203ENST00000471658 WASH4PA8MWX3 477 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 FGF10O15520 208 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-203ENST00000471658 MFSD11O43934 449 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 PSMC3P17980 439 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 NUMBP49757 651 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 FCHO2Q0JRZ9 810 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 DHCR24Q15392 516 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 MPPE1Q53F39 396 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 TMCO3Q6UWJ1 677 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 MTSS1LQ765P7 747 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 B4GALNT4Q76KP1 1039 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 YAF2Q8IY57 180 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 HJURPQ8NCD3 748 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-203ENST00000471658 OR52K2Q8NGK3 314 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 TTC8Q8TAM2 541 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 WFDC5Q8TCV5 224 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 C1orf54Q8WWF1 131 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 ATG4AQ8WYN0 398 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 OTUB2Q96DC9 234 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 HPS4Q9NQG7 708 aa19.74■□□□□ 0.75
PSPC1-203ENST00000471658 THG1LQ9NWX6 298 aaKnown RBP19.74■□□□□ 0.75
PSPC1-203ENST00000471658 CYP17A1P05093 508 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 HOXD9P28356 352 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-203ENST00000471658 GDI1P31150 447 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 PAFAH1B1P43034 410 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 CDH4P55283 916 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 PAFAH1B3Q15102 231 aaKnown RBP19.73■□□□□ 0.75
PSPC1-203ENST00000471658 CARNMT1Q8N4J0 409 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 NOL6Q9H6R4 1146 aaKnown RBP19.73■□□□□ 0.75
PSPC1-203ENST00000471658 RNF14Q9UBS8 474 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 NEDD8-MDP1E9PL57 170 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 KRIT1O00522 736 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 OTUD4Q01804 1114 aaKnown RBP19.73■□□□□ 0.75
PSPC1-203ENST00000471658 KCTD19Q17RG1 926 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-203ENST00000471658 WHAMMP3Q1A5X7 153 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 AAK1Q2M2I8 961 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 ANO4Q32M45 955 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 FSCBQ5H9T9 825 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 ARHGAP12Q8IWW6 846 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 KIAA1958Q8N8K9 716 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 PRELID2Q8N945 189 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 BBS2Q9BXC9 721 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 C10orf88Q9H8K7 445 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 DTLQ9NZJ0 730 aa19.73■□□□□ 0.75
PSPC1-203ENST00000471658 MYOFQ9NZM1 2061 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 A0A1B0GVM2 712 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 TCAF2A6NFQ2 919 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 APOC4-APOC2K7ER74 178 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 CLDN11O75508 207 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 PENKP01210 267 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-203ENST00000471658 APOC2P02655 101 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 CYBBP04839 570 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 ASGR2P07307 311 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 ZFXP17010 805 aaPredicted RBP19.72■□□□□ 0.75
PSPC1-203ENST00000471658 OR1E1P30953 314 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 TUBB2AQ13885 445 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 PDGFRLQ15198 375 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 FAM182AQ5T1J6 154 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 NAT16Q8N8M0 369 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 ACTL9Q8TC94 416 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 DEPDC1BQ8WUY9 529 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 TUBB2BQ9BVA1 445 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 TRMT61BQ9BVS5 477 aaKnown RBP19.72■□□□□ 0.75
PSPC1-203ENST00000471658 SLC39A8Q9C0K1 460 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 KCNK12Q9HB15 430 aa19.72■□□□□ 0.75
PSPC1-203ENST00000471658 COL6A3P12111 3177 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 DOCK4Q8N1I0 1966 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 LUC7L3O95232 432 aaKnown RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 TYRP14679 529 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 TGM2P21980 687 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 ZNF177Q13360 481 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 SNX1Q13596 522 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 PUS10Q3MIT2 529 aaKnown RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 TTC39BQ5VTQ0 682 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 ASTLQ6HA08 431 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 CXorf57Q6NSI4 855 aaKnown RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 CHST9Q7L1S5 443 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 PLCD3Q8N3E9 789 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 P3H4Q92791 437 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 NAP1L3Q99457 506 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-203ENST00000471658 CARD6Q9BX69 1037 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 ECT2Q9H8V3 914 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 L2HGDHQ9H9P8 463 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 GTSE1Q9NYZ3 720 aa19.71■□□□□ 0.75
PSPC1-203ENST00000471658 TYW5A2RUC4 315 aaKnown RBP19.7■□□□□ 0.74
PSPC1-203ENST00000471658 H0Y626 953 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 TRIM24O15164 1050 aa19.7■□□□□ 0.74
PSPC1-203ENST00000471658 CHADO15335 359 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms