RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TSTD1Q8NFU3 115 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 ATRIPQ8WXE1 791 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 PANX2Q96RD6 677 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 ACOX2Q99424 681 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 SEMA4AQ9H3S1 761 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 POLR3BQ9NW08 1133 aaPredicted RBP15.75■□□□□ 0.11
SDC3-203ENST00000471567 INTS6Q9UL03 887 aaKnown RBP15.75■□□□□ 0.11
SDC3-203ENST00000471567 PLA2G4CQ9UP65 541 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 TBC1D30Q9Y2I9 924 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 SNX10Q9Y5X0 201 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 LILRB5O75023 590 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ALDH1A2O94788 518 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 DLDP09622 509 aaKnown RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 HOXB2P14652 356 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 L1CAMP32004 1257 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 CNR2P34972 360 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 IRAK1P51617 712 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 PIGHQ14442 188 aaPredicted RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 ZNF234Q14588 700 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 PLEKHG6Q3KR16 790 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 FUT11Q495W5 492 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ALFQ53S48 1182 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 PITRM1Q5JRX3 1037 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 EFHC2Q5JST6 749 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ARTNQ5T4W7 220 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 MANEALQ5VSG8 457 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 CXorf57Q6NSI4 855 aaKnown RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 SETD3Q86TU7 594 aaPredicted RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 CIR1Q86X95 450 aaPredicted RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 CTNNBL1Q8WYA6 563 aaPredicted RBP15.74■□□□□ 0.11
SDC3-203ENST00000471567 ARHGEF26Q96DR7 871 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 HHIPQ96QV1 700 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 NUP85Q9BW27 656 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 TRIM7Q9C029 511 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ZYG11BQ9C0D3 744 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 ZDHHC4Q9NPG8 344 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 CACNA2D2Q9NY47 1150 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 UVRAGQ9P2Y5 699 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 IP6K2Q9UHH9 426 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 FZD10Q9ULW2 581 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 STON1Q9Y6Q2 735 aa15.74■□□□□ 0.11
SDC3-203ENST00000471567 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
SDC3-203ENST00000471567 PROB1E7EW31 1015 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 CNTN5O94779 1100 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 TMEM253P0C7T8 217 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 PCK1P35558 622 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 CSKP41240 450 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 WASP42768 502 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 FNTBP49356 437 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 SULT2A1Q06520 285 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 RASSF3Q86WH2 238 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 PSTKQ8IV42 348 aaKnown RBP15.73■□□□□ 0.11
SDC3-203ENST00000471567 CCDC170Q8IYT3 715 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 ARFGAP1Q8N6T3 406 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 NIPA2Q8N8Q9 360 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 KDM1BQ8NB78 822 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 SORCS1Q8WY21 1168 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
SDC3-203ENST00000471567 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 FAM86C1Q9NVL1 165 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 MPP6Q9NZW5 540 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 IMPACTQ9P2X3 320 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 LCMT1Q9UIC8 334 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 INTUQ9ULD6 942 aa15.73■□□□□ 0.11
SDC3-203ENST00000471567 A0A1W2PQF6 199 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 MYO1FO00160 1098 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 AXIN1O15169 862 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ZBTB24O43167 697 aaPredicted RBP15.72■□□□□ 0.11
SDC3-203ENST00000471567 PRPSAP2O60256 369 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 LRIG2O94898 1065 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 SRPRAP08240 638 aaKnown RBP15.72■□□□□ 0.11
SDC3-203ENST00000471567 FECHP22830 423 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 MIPP30301 263 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 HTR7P34969 479 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 IL12RB1P42701 662 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 DMWDQ09019 674 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 STARD3Q14849 445 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 PTPRNQ16849 979 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 HEATR6Q6AI08 1181 aaKnown RBP15.72■□□□□ 0.11
SDC3-203ENST00000471567 SERPINA13PQ6UXR4 307 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ZNF783Q6ZMS7 281 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.72■□□□□ 0.11
SDC3-203ENST00000471567 APCDD1Q8J025 514 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ZNF564Q8TBZ8 553 aaPredicted RBP15.72■□□□□ 0.11
SDC3-203ENST00000471567 CYB5D2Q8WUJ1 264 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 TBC1D31Q96DN5 1066 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ALG14Q96F25 216 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 FEM1AQ9BSK4 669 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 PACSIN1Q9BY11 444 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 TMEM245Q9H330 911 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 CD248Q9HCU0 757 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 CTTNBP2NLQ9P2B4 639 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ZNF212Q9UDV6 495 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 ANAPC7Q9UJX3 599 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 OR51B4Q9Y5P0 310 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 R4GN57 208 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms