RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ABCG4Q9H172 646 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 PABPC3Q9H361 631 aaKnown RBP9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 KCND1Q9NSA2 647 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 PANK4Q9NVE7 773 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 OSER1Q9NX31 292 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 CLIC5Q9NZA1 410 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 CGNQ9P2M7 1197 aaKnown RBP9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 RASAL2Q9UJF2 1139 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 NUDT5Q9UKK9 219 aa9.28□□□□□ -0.92
SYNGAP1-205ENST00000470232 PTPN13Q12923 2485 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 TP53BP1Q12888 1972 aaPredicted RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 A0A1W2PR77 199 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCP110O43303 1012 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 BEST1O76090 585 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SERPINC1P01008 464 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 DLDP09622 509 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCDC130P13994 396 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 NUDT1P36639 197 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 HARS2P49590 506 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 DUSP3P51452 185 aaPredicted RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CASP5P51878 434 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SNRPFP62306 86 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 EFEMP1Q12805 493 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 OVGP1Q12889 678 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 ZNF699Q32M78 642 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SFMBT2Q5VUG0 894 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SND1Q7KZF4 910 aaKnown RBP eCLIP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 PRPF39Q86UA1 669 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 IQCHQ86VS3 1027 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CRYBG2Q8N1P7 616 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 ARHGAP18Q8N392 663 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 ZNF366Q8N895 744 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CYB5D2Q8WUJ1 264 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCDC127Q96BQ5 260 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 TMA16Q96EY4 203 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 VCPIP1Q96JH7 1222 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 MFRPQ9BY79 579 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 RSPH9Q9H1X1 276 aaPredicted RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 NEUROG2Q9H2A3 272 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SMYD3Q9H7B4 428 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 FZD4Q9ULV1 537 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 UBR5O95071 2799 aaPredicted RBP9.27□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLC12A8A0AV02 714 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 SIGLEC6O43699 453 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 OPA1O60313 960 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 GP1BAP07359 652 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 ALPPL2P10696 532 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 GP1BBP13224 206 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 ADORA2BP29275 332 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 UBASH3AP57075 661 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 CYP24A1Q07973 514 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 BIRC3Q13489 604 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 STAT4Q14765 748 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 CDCP2Q5VXM1 449 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 KIAA1614Q5VZ46 1190 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 MBLAC2Q68D91 279 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 IGF2-ASQ6U949 168 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 RSRC2Q7L4I2 434 aaKnown RBP9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 XXYLT1Q8NBI6 393 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 KIF18AQ8NI77 898 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 JAKMIP2Q96AA8 810 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 PLD4Q96BZ4 506 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 TRIM4Q9C037 500 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 LRRC27Q9C0I9 530 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 XYLT2Q9H1B5 865 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 EBF2Q9HAK2 575 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 MARCH2Q9P0N8 246 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 ANKMY1Q9P2S6 941 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 GGA2Q9UJY4 613 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 CLEC4EQ9ULY5 219 aa9.26□□□□□ -0.93
SYNGAP1-205ENST00000470232 PLXNA2O75051 1894 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TEX15Q9BXT5 2789 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3DA0A087WVF3 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3IA0A087WXS9 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3EA0A087X179 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3KA0A087X1G2 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 A0A1W2PP55 124 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 FRMD3A2A2Y4 597 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TARSL2A2RTX5 802 aaKnown RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3FA6NER0 549 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3LB9A6J9 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TERTO14746 1132 aaKnown RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CSO75390 466 aaKnown RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 KIF20AO95235 890 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TUBB4AP04350 444 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3HP0C7X1 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 PABPC1P11940 636 aaKnown RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 GOT1P17174 413 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 HLA-FP30511 346 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms