RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 LATS1O95835 1130 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 CASP4P49662 377 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 SGSHP51688 502 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 AP3M2P53677 418 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 IFI44Q8TCB0 444 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 FAM131CQ96AQ9 280 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 KLHDC7BQ96G42 594 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 LMLNQ96KR4 655 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 PSMG3-AS1Q96PY0 264 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 DUSP16Q9BY84 665 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.41
LSM2-209ENST00000470083 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 EDDM13A0A1B0GTR0 161 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 PMS2P1A4D2B8 440 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 CLIC2O15247 247 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 PIAS2O75928 621 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 TNFSF15O95150 251 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 KIF20AO95235 890 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 VNN1O95497 513 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 ITGA2BP08514 1039 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 TGM2P21980 687 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 MAT2AP31153 395 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 DRD3P35462 400 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 TXLNAP40222 546 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 CSKP41240 450 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 AFMP43652 599 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 ASPAP45381 313 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 YWHAGP61981 247 aaKnown RBP eCLIP12.45□□□□□ -0.42
LSM2-209ENST00000470083 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 CLDN10P78369 228 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 RBM44Q6ZP01 1051 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 TRIM69Q86WT6 500 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 WDR36Q8NI36 951 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 PLEKHO2Q8TD55 490 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 DUSP23Q9BVJ7 150 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 HBS1LQ9Y450 684 aaKnown RBP12.45□□□□□ -0.42
LSM2-209ENST00000470083 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
LSM2-209ENST00000470083 ITIH6Q6UXX5 1313 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 K7ESM1 405 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 SCAMP1O15126 338 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 SLC7A4O43246 635 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 TCEA3O75764 348 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 C4BPAP04003 597 aaKnown RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 THEGLP0DJG4 465 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 ELAVL3Q14576 367 aaKnown RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 PIK3R6Q5UE93 754 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 FOXR1Q6PIV2 292 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 MFN1Q8IWA4 741 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 STK40Q8N2I9 435 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 TPCN2Q8NHX9 752 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 FIBINQ8TAL6 211 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 TAF4BQ92750 862 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 SLC25A18Q9H1K4 315 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 OLA1Q9NTK5 396 aaKnown RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 KCNK4Q9NYG8 393 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 INTS6Q9UL03 887 aaKnown RBP12.44□□□□□ -0.42
LSM2-209ENST00000470083 CA5BQ9Y2D0 317 aa12.44□□□□□ -0.42
LSM2-209ENST00000470083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 PLRG1O43660 514 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 TBL1XO60907 577 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 RNGTTO60942 597 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 RTN2O75298 545 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 ASS1P00966 412 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 IL1BP01584 269 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 SRPRAP08240 638 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 STAT6P42226 847 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 ZNF177Q13360 481 aaPredicted RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 POM121L1PQ3SYA9 428 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 RAB41Q5JT25 222 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 PARD3BQ8TEW8 1205 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 IFT43Q96FT9 208 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 WDR70Q9NW82 654 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 GEMIN8Q9NWZ8 242 aaKnown RBP12.43□□□□□ -0.42
LSM2-209ENST00000470083 NCKIPSDQ9NZQ3 722 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 ACSL6Q9UKU0 697 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms