RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TNIP3Q96KP6 325 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 LRRC40Q9H9A6 602 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 CASS4Q9NQ75 786 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 PIH1D1Q9NWS0 290 aaKnown RBP13.99□□□□□ -0.17
BRCA1-209ENST00000470026 RPS6KL1Q9Y6S9 549 aa13.99□□□□□ -0.17
BRCA1-209ENST00000470026 ZCWPW2A0A1B0GU75 182 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 MEI4A8MW99 385 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 F5H423 210 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-209ENST00000470026 MAP3K13O43283 966 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 USP1O94782 785 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 AP2A1O95782 977 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 DARSP14868 501 aaKnown RBP13.98□□□□□ -0.17
BRCA1-209ENST00000470026 AXLP30530 894 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 MLH1P40692 756 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 TAF6P49848 677 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 AIF1P55008 147 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 ADIGQ0VDE8 80 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 SCAPQ12770 1279 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 IFRD2Q12894 506 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-209ENST00000470026 CDC16Q13042 620 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 PDPK2PQ6A1A2 396 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 DCLK2Q8N568 766 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 APPL2Q8NEU8 664 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 NDRG1Q92597 394 aaKnown RBP13.98□□□□□ -0.17
BRCA1-209ENST00000470026 JADE3Q92613 823 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 NTAN1Q96AB6 310 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 CCDC28BQ9BUN5 200 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 TMPRSS4Q9NRS4 437 aa13.98□□□□□ -0.17
BRCA1-209ENST00000470026 TMEM114B3SHH9 223 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PTPN3P26045 913 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SPRP35270 261 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 HCAR3P49019 387 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SERPINB8P50452 374 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CACNA2D1P54289 1103 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 DUSP28Q4G0W2 176 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 DCAF6Q58WW2 860 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 EPGNQ6UW88 154 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 IZUMO2Q6UXV1 221 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 RNF111Q6ZNA4 994 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 OSTM1Q86WC4 334 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 B3GALNT2Q8NCR0 500 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 WNT8BQ93098 351 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 TRAPPC9Q96Q05 1148 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PDP2Q9P2J9 529 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 STAP1Q9ULZ2 295 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 MBLAC1A4D2B0 266 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 ERI2A8K979 691 aaKnown RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 G3V2L1 256 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 EEF2KO00418 725 aaKnown RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 MPOP05164 745 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PIM1P11309 404 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 NPR3P17342 541 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SMPD1P17405 629 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PPIDQ08752 370 aaKnown RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CCNIQ14094 377 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SV2CQ496J9 727 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 RALGPS1Q5JS13 557 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 INTS6LQ5JSJ4 861 aaKnown RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PID1Q7Z2X4 250 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CMC1Q7Z7K0 106 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 TP53INP2Q8IXH6 220 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PLD6Q8N2A8 252 aaKnown RBP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 TOP6BLQ8N6T0 577 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
BRCA1-209ENST00000470026 NETO2Q8NC67 525 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 PHC3Q8NDX5 983 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 STON2Q8WXE9 905 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 FAM149B1Q96BN6 582 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CEP41Q9BYV8 373 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CDH19Q9H159 772 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 TXNDC16Q9P2K2 825 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CDH22Q9UJ99 828 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 CDY1Q9Y6F8 540 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 NRCAMQ92823 1304 aa13.97□□□□□ -0.17
BRCA1-209ENST00000470026 C9IYK1 514 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 M0QYT0 321 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 XPOTO43592 962 aaKnown RBP13.96□□□□□ -0.17
BRCA1-209ENST00000470026 FYNP06241 537 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 LYNP07948 512 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 ITGAXP20702 1163 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 CYP2B6P20813 491 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 GJA5P36382 358 aa13.96□□□□□ -0.17
BRCA1-209ENST00000470026 CSE1LP55060 971 aaKnown RBP13.96□□□□□ -0.17
BRCA1-209ENST00000470026 GJA9P57773 515 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms