RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 EPHB3P54753 998 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 SEMA5AQ13591 1074 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 AGBL2Q5U5Z8 902 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 LRRC31Q6UY01 552 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 PID1Q7Z2X4 250 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 DNAJB7Q7Z6W7 309 aaPredicted RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 ARHGAP12Q8IWW6 846 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 WDR83Q9BRX9 315 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 TMEM109Q9BVC6 243 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 VPS37BQ9H9H4 285 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 SSX2IPQ9Y2D8 614 aa18.62■□□□□ 0.57
SMC4-211ENST00000469858 HBS1LQ9Y450 684 aaKnown RBP18.62■□□□□ 0.57
SMC4-211ENST00000469858 COCHO43405 550 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 AVILO75366 819 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ZNF189O75820 626 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 CXCL14O95715 111 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ABHD2P08910 425 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 PSMB4P28070 264 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 CTNNB1P35222 781 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 LMAN1P49257 510 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 NUGGCQ68CJ6 796 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 TFAP2DQ7Z6R9 452 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 CROCCP2Q86T23 111 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ZNF683Q8IZ20 524 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ZNF276Q8N554 614 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ATPAF2Q8N5M1 289 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 LZTR1Q8N653 840 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 FBXO36Q8NEA4 188 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 ALG13Q9NP73 1137 aaKnown RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 NOVA2Q9UNW9 492 aaKnown RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 OBSL1O75147 1896 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 A0A087WUV0 522 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 MTSS1O43312 755 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 TGM5O43548 720 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 TPSB2P20231 275 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 COG7P83436 770 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 TPSAB1Q15661 275 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 FBXL22Q6P050 247 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ARHGAP36Q6ZRI8 547 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 CHSY1Q86X52 802 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 FRMD8Q9BZ67 464 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 ROPN1BQ9BZX4 212 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 ZYG11BQ9C0D3 744 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 SLC39A8Q9C0K1 460 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 ROPN1Q9HAT0 212 aaPredicted RBP18.61■□□□□ 0.57
SMC4-211ENST00000469858 CHMP2BQ9UQN3 213 aa18.61■□□□□ 0.57
SMC4-211ENST00000469858 CLUHO75153 1309 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 RGS16O15492 202 aaPredicted RBP18.6■□□□□ 0.57
SMC4-211ENST00000469858 GABPB1Q06547 395 aaPredicted RBP18.6■□□□□ 0.57
SMC4-211ENST00000469858 ZBTB17Q13105 803 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 C6orf118Q5T5N4 469 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 NLRP14Q86W24 1093 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 PSMG2Q969U7 264 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 ENTPD7Q9NQZ7 604 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 PPARGC1AQ9UBK2 798 aaKnown RBP18.6■□□□□ 0.57
SMC4-211ENST00000469858 MAFFQ9ULX9 164 aa18.6■□□□□ 0.57
SMC4-211ENST00000469858 GOLGA6L7A0A1B0GV03 622 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 CNTN5O94779 1100 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 RHOQP17081 205 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 NR1D1P20393 614 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 HPDP32754 393 aaPredicted RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 ELK3P41970 407 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PARP6Q2NL67 630 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 ALFQ53S48 1182 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 NADSYN1Q6IA69 706 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 KLHDC10Q6PID8 442 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 CAND1Q86VP6 1230 aaKnown RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 PDCD7Q8N8D1 485 aaKnown RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 ATP11CQ8NB49 1132 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 MCUQ8NE86 351 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PHOSPHO2Q8TCD6 241 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 IGSF8Q969P0 613 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PGM2Q96G03 612 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PKNOX2Q96KN3 472 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 RPRD1AQ96P16 312 aaPredicted RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 AGAP3Q96P47 875 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PRMT1Q99873 361 aaKnown RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 UXTQ9UBK9 157 aaPredicted RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 SSTR1P30872 391 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 BMPR1AP36894 532 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 GPX6P59796 221 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 ERVFC1P60507 584 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 MAGOHP61326 146 aaKnown RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 STAT4Q14765 748 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 CCDC38Q502W7 563 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 IGDCC3Q8IVU1 814 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 PALM2Q8IXS6 379 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 CCDC77Q9BR77 488 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 ZNF334Q9HCZ1 680 aaPredicted RBP18.59■□□□□ 0.57
SMC4-211ENST00000469858 IGSF9Q9P2J2 1179 aa18.59■□□□□ 0.57
SMC4-211ENST00000469858 IGLV3-10A0A075B6K4 115 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 ZBTB24O43167 697 aaPredicted RBP18.58■□□□□ 0.56
SMC4-211ENST00000469858 ADH1AP07327 375 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 IVLP07476 585 aa18.58■□□□□ 0.56
SMC4-211ENST00000469858 HARS2P49590 506 aaKnown RBP18.58■□□□□ 0.56
SMC4-211ENST00000469858 ZNF534Q76KX8 674 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms