RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM155AB1AL88 458 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CLDN25C9JDP6 229 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 H3BSA7 217 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 AP3B1O00203 1094 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FCHO1O14526 889 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GIPC1O14908 333 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PDPK1O15530 556 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GPAA1O43292 621 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 MTSS1O43312 755 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ASNA1O43681 348 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 TYROBPO43914 113 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 AOC2O75106 756 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CPNE3O75131 537 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SPAG6O75602 509 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KRT8P05787 483 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FYNP06241 537 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 S100A6P06703 90 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ABCB1P08183 1280 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 INHBBP09529 407 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 DLDP09622 509 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 POLR2MP0CAP2 368 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ITGA4P13612 1032 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ATF2P15336 505 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FGFR4P22455 802 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SERPINB1P30740 379 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RRM2P31350 389 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 STAT3P40763 770 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RAP1GAPP47736 663 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SERPINB10P48595 397 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KLK7P49862 253 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PMS1P54277 932 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RNASE9P60153 205 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CDK5R2Q13319 367 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 IFIT5Q13325 482 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PPIL2Q13356 520 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SNX17Q15036 470 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 TCEA2Q15560 299 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 TMEM95Q3KNT9 176 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GRAMD1BQ3KR37 738 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 LSM12Q3MHD2 195 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CDONQ4KMG0 1287 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SFT2D3Q587I9 215 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FSCBQ5H9T9 825 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CEP78Q5JTW2 689 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 LGSNQ5TDP6 509 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PPP1R2P3Q6NXS1 205 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PGM2L1Q6PCE3 622 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 XKRXQ6PP77 449 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 C16orf89Q6UX73 402 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RAPH1Q70E73 1250 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FASTKD5Q7L8L6 764 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ARCQ7LC44 396 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 IRF2BP2Q7Z5L9 587 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 AKAP14Q86UN6 197 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CAND1Q86VP6 1230 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC28AQ8IWP9 274 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ZC3H3Q8IXZ2 948 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PM20D2Q8IYS1 436 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SIX6OS1Q8N1H7 587 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FBXW8Q8N3Y1 598 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ZCCHC9Q8N567 271 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 METTL25Q8N6Q8 603 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 USHBP1Q8N6Y0 703 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF713Q8N859 430 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ANKRD53Q8N9V6 530 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FAM181AQ8N9Y4 354 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 DAGLBQ8NCG7 672 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SLC26A7Q8TE54 656 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 U2AF1L4Q8WU68 220 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RAB2BQ8WUD1 216 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 OSCP1Q8WVF1 389 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PEX13Q92968 403 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 OSBP2Q969R2 916 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ISOC1Q96CN7 298 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CLIP3Q96DZ5 547 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 DCUN1D1Q96GG9 259 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KAZALD1Q96I82 304 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 APOPT1Q96IL0 206 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 PSKH2Q96QS6 385 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RANBP9Q96S59 729 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ZSWIM1Q9BR11 485 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 C17orf80Q9BSJ5 609 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 THTPAQ9BU02 230 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 WDR18Q9BV38 432 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SEZ6LQ9BYH1 1024 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 RHOBTB2Q9BYZ6 727 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 FRMD8Q9BZ67 464 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GCOM2Q9BZD3 368 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 TRIM31Q9BZY9 425 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KLHL25Q9H0H3 589 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 GANQ9H2C0 597 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 ACSS3Q9H6R3 686 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 KIAA1586Q9HCI6 787 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 CD320Q9NPF0 282 aa4.98□□□□□ -1.61
SF3B1-207ENST00000468925 THG1LQ9NWX6 298 aaKnown RBP4.98□□□□□ -1.61
SF3B1-207ENST00000468925 SYBUQ9NX95 663 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms