RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 FAM204AQ9H8W3 233 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 NHEJ1Q9H9Q4 299 aaPredicted RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 HPS4Q9NQG7 708 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 SPHK2Q9NRA0 654 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 GKN1Q9NS71 199 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 SEPT11Q9NVA2 429 aaKnown RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 DDIT4Q9NX09 232 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 SMPD4Q9NXE4 827 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 ARHGEF38Q9NXL2 777 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 DONSONQ9NYP3 566 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 TAS2R14Q9NYV8 317 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 PPARGC1AQ9UBK2 798 aaKnown RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 TJP2Q9UDY2 1190 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 CNOT8Q9UFF9 292 aaKnown RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 RASAL2Q9UJF2 1139 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 FBXO10Q9UK96 956 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 FBXL21Q9UKT6 434 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 AGO1Q9UL18 857 aaKnown RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 NAALADL1Q9UQQ1 740 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 PIAS3Q9Y6X2 628 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 GVINP1Q7Z2Y8 2422 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 TNRC6BQ9UPQ9 1833 aaKnown RBP3.65□□□□□ -1.83
TRIM59-202ENST00000468542 CACNA1EQ15878 2313 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.83
TRIM59-202ENST00000468542 RIF1Q5UIP0 2472 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SHROOM3Q8TF72 1996 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC163A0A0D9SF12 145 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 A0A1B0GVM2 712 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 KRBA1A5PL33 1030 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TCAF2A6NFQ2 919 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM221A6NGB7 291 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 OTOL1A6NHN0 477 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 DRGXA6NNA5 263 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ZNF487B1APH4 448 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CHURC1-FNTBB4DL54 471 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 F5H5T6 163 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 M0QYT0 321 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 M0R296 226 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MYO1FO00160 1098 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MSTNO14793 375 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MDM4O15151 490 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ARHGAP6O43182 974 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MSI1O43347 362 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 NARSO43776 548 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ACSL4O60488 711 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ATG13O75143 517 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CLDN11O75508 207 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 RNF8O76064 485 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 NDUFA10O95299 355 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 PROCP04070 461 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 THBS1P07996 1170 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 PLEKP08567 350 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ADH5P11766 374 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SKILP12757 684 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GPD1P21695 349 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 HOXD9P28356 352 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 HOXC13P31276 330 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 L1CAMP32004 1257 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GJA4P35212 333 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ADRA1BP35368 520 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ETFBP38117 255 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GRIA2P42262 883 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SLC1A1P43005 524 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 HCAR3P49019 387 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 PLK1P53350 603 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GALCP54803 685 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 HDAC4P56524 1084 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 RPL7AP62424 266 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 DEUP1Q05D60 604 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GFPT1Q06210 699 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TNK2Q07912 1038 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GRSF1Q12849 480 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SEMA3BQ13214 749 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 LRRC32Q14392 662 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 DMC1Q14565 340 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 LBRQ14739 615 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SPA17Q15506 151 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 GAB4Q2WGN9 574 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC14Q49A88 953 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM259Q4ZIN3 620 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 BOLA3Q53S33 107 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 FAM133BQ5BKY9 247 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ZC3H12AQ5D1E8 599 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MS4A13Q5J8X5 152 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM31Q5JXX7 168 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 RABGAP1LQ5R372 815 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 LY6G5CQ5SRR4 150 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC122Q5T0U0 273 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 PIK3R6Q5UE93 754 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 MANEALQ5VSG8 457 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 FYB2Q5VWT5 728 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TRNP1Q6NT89 227 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 ZNF662Q6ZS27 426 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TPRG1Q6ZUI0 275 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 CHST9Q7L1S5 443 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TRMT11Q7Z4G4 463 aaKnown RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 POLNQ7Z5Q5 900 aa3.64□□□□□ -1.83
TRIM59-202ENST00000468542 KIAA0907Q7Z7F0 614 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 SETD3Q86TU7 594 aaPredicted RBP3.64□□□□□ -1.83
TRIM59-202ENST00000468542 TMEM139Q8IV31 216 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms