RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CCNYQ8ND76 341 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 PGBD4Q96DM1 585 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 FAM49AQ9H0Q0 323 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 PLEKHA5Q9HAU0 1116 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 EIF2B3Q9NR50 452 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 COL1A2P08123 1366 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 DYNC1LI2O43237 492 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 OPHN1O60890 802 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 GRK2P25098 689 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 MLH1P40692 756 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 SULT1E1P49888 294 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 COPAP53621 1224 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 GSTA3Q16772 222 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 EFHC1Q5JVL4 640 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 PHC3Q8NDX5 983 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 NDRG1Q92597 394 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 SHCBP1LQ9BZQ2 653 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 TMPRSS4Q9NRS4 437 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 COPG2Q9UBF2 871 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 DERAQ9Y315 318 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 HES2Q9Y543 173 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 TTC36A6NLP5 189 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 RALBP11234 206 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 LMO2P25791 158 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 SCNN1AP37088 669 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 DGKDQ16760 1214 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 INSCQ1MX18 579 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 VWA5B1Q5TIE3 1220 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 MFN1Q8IWA4 741 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 DEFB106AQ8N104 65 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 LRRC52Q8N7C0 313 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 SNX27Q96L92 541 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 NR1H4Q96RI1 486 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 DNAJC28Q9NX36 388 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 SYNJ2BP-COX16A0A087WUM0 186 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 CRABP2P29373 138 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 ARRB2P32121 409 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 GNL1P36915 607 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 ACADSBP45954 432 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 EPHB1P54762 984 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 ABCE1P61221 599 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 FKBP1BP68106 108 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 ZBTB6Q15916 424 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 PDPK2PQ6A1A2 396 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 NME8Q8N427 588 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 FAM149B1Q96BN6 582 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 IFT43Q96FT9 208 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 FAM96AQ9H5X1 160 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 S100A14Q9HCY8 104 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 ZNF358Q9NW07 568 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 COX16Q9P0S2 106 aa16.18■□□□□ 0.18
TSPAN4-211ENST00000468468 POLBP06746 335 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 NCF2P19878 526 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 GARSP41250 739 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 MATKP42679 507 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 ROR2Q01974 943 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 ITGA9Q13797 1035 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 C9orf57Q5W0N0 161 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 AAGABQ6PD74 315 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 SLC2A14Q8TDB8 520 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 PYDC1Q8WXC3 89 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 PGLYRP2Q96PD5 576 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 DDX50Q9BQ39 737 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CDHR5Q9HBB8 845 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CREB3O43889 395 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 MX2P20592 715 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 GP5P40197 560 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 RPL34P49207 117 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 GLUD2P49448 558 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 IFRD2Q12894 506 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CDC16Q13042 620 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CMC1Q7Z7K0 106 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 ZNF567Q8N184 647 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CRYBG2Q8N1P7 616 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 RNF139Q8WU17 664 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 KBTBD7Q8WVZ9 684 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 MYO18AQ92614 2054 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CERS2Q96G23 380 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 CYP4F11Q9HBI6 524 aa16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 RCOR3Q9P2K3 495 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-211ENST00000468468 PDE5AO76074 875 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 CPA3P15088 417 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 HOXA11P31270 313 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 PITX1P78337 314 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 OLIG2Q13516 323 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 PDK1Q15118 436 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 SLC25A52Q3SY17 297 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 DCAF6Q58WW2 860 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 PID1Q7Z2X4 250 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 ATXN7L3BQ96GX2 97 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms