RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 FAM131BQ86XD5 332 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 SLC41A1Q8IVJ1 513 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 OR52K2Q8NGK3 314 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 OR2T3Q8NH03 318 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 RXFP2Q8WXD0 754 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 TOE1Q96GM8 510 aaKnown RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 MYO19Q96H55 970 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 ADAM22Q9P0K1 906 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 SUN2Q9UH99 717 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 SLCO3A1Q9UIG8 710 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 EP300Q09472 2414 aaPredicted RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 FAM186AA6NE01 2351 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 KHNYNO15037 678 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 ASLP04424 464 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 FERP16591 822 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 MAOBP27338 520 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 CD6P30203 668 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 STK19P49842 368 aaPredicted RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 TPMTP51580 245 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 RPS14P62263 151 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 ECT2LQ008S8 904 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 PTP4A2Q12974 167 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 ZNF177Q13360 481 aaPredicted RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 CCDC14Q49A88 953 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 ALFQ53S48 1182 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 BRMS1LQ5PSV4 323 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 CXorf57Q6NSI4 855 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 IRF2BP2Q7Z5L9 587 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 NETO1Q8TDF5 533 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 BAP1Q92560 729 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 MAGEB5Q9BZ81 275 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 FSCN3Q9NQT6 498 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 MPP6Q9NZW5 540 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
CDHR3-205ENST00000468143 VPS13AQ96RL7 3174 aa11.9□□□□□ -0.5
CDHR3-205ENST00000468143 A0A1B0GTH6 734 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 FOXD2O60548 495 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 SIN3BO75182 1162 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 KRT3P12035 628 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 TNFAIP3P21580 790 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 SDHBP21912 280 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 SDC4P31431 198 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 FANCCQ00597 558 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 MTA1Q13330 715 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 NR1I3Q14994 352 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 ZSCAN23Q3MJ62 389 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 TRIM61Q5EBN2 209 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 STPG1Q5TH74 334 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 BNIPLQ7Z465 357 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 DNAAF5Q86Y56 855 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 PHF13Q86YI8 300 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 SYT12Q8IV01 421 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 RGL4Q8IZJ4 473 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 ZNF419Q96HQ0 510 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 EDEM2Q9BV94 578 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 WSB2Q9NYS7 404 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-205ENST00000468143 TAS2R14Q9NYV8 317 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
CDHR3-205ENST00000468143 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 C2CD4BA6NLJ0 364 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 DRGXA6NNA5 263 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 C4orf47A7E2U8 309 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 E9PAM4 449 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 SLC30A4O14863 429 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 CLDN11O75508 207 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 ENDOD1O94919 500 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 DNTTP04053 509 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 CFIP05156 583 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 CALB1P05937 261 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
CDHR3-205ENST00000468143 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 VAV1P15498 845 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 KCNA4P22459 653 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 OXTRP30559 389 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 PLK1P53350 603 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 CDH4P55283 916 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 TPM4P67936 248 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 FOXK2Q01167 660 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 SLC12A1Q13621 1099 aa11.88□□□□□ -0.51
CDHR3-205ENST00000468143 ASIC2Q16515 512 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms