RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 METTL18O95568 372 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 AP2A1O95782 977 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 PRKCHP24723 683 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 PTPN3P26045 913 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LSP1P33241 339 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 OR1D2P34982 312 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 ELK3P41970 407 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 NPY2RP49146 381 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 SLC11A2P49281 568 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 RENBPP51606 427 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 GYS2P54840 703 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TNK2Q07912 1038 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 DNAJC3Q13217 504 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TAF12Q16514 161 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LONRF1Q17RB8 773 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LRRC26Q2I0M4 334 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 PARP15Q460N3 678 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 C5orf22Q49AR2 442 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 HECTD3Q5T447 861 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 FAM72AQ5TYM5 149 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 NAPEPLDQ6IQ20 393 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 FAM72DQ6L9T8 149 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 FAM72BQ86X60 149 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TCEAL8Q8IYN2 117 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 ZNF567Q8N184 647 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 GSDMBQ8TAX9 411 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 PHOSPHO2Q8TCD6 241 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 MAML1Q92585 1016 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 CDKL2Q92772 493 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TTC17Q96AE7 1141 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 TEKT5Q96M29 485 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 YME1L1Q96TA2 773 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 MTIF3Q9H2K0 278 aaKnown RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 C10orf88Q9H8K7 445 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LRRC40Q9H9A6 602 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 RXFP1Q9HBX9 757 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 ANLNQ9NQW6 1124 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 PRDM5Q9NQX1 630 aaPredicted RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 INTS9Q9NV88 658 aaKnown RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 DNAJC17Q9NVM6 304 aaKnown RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 NKIRAS1Q9NYS0 192 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 BFARQ9NZS9 450 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 ZC3H7BQ9UGR2 993 aaKnown RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 SFMBT1Q9UHJ3 866 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 RABGEF1Q9UJ41 708 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 GGA2Q9UJY4 613 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 LZTS1Q9Y250 596 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 HS3ST4Q9Y661 456 aa10.45□□□□□ -0.74
MSH5-213ENST00000468136 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.45□□□□□ -0.74
MSH5-213ENST00000468136 TCRBV7S3A2A0A539 114 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 SLC12A8A0AV02 714 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 NT5C1B-RDH14C9J2C7 533 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 GOLGA8MH3BSY2 632 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 I6L893 689 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 PRPF4O43172 522 aaKnown RBP eCLIP10.44□□□□□ -0.74
MSH5-213ENST00000468136 KRT37O76014 449 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 VNN2O95498 520 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 INHBAP08476 426 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 PGAM1P18669 254 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 ETFBP38117 255 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 HARS2P49590 506 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 RABGGTBP53611 331 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 EPHB3P54753 998 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 GPX6P59796 221 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 EFEMP1Q12805 493 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 HNRNPDQ14103 355 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 TTC39BQ5VTQ0 682 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 STEAP4Q687X5 459 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 RSPO2Q6UXX9 243 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 CCDC149Q6ZUS6 474 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 B4GALNT4Q76KP1 1039 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 EXOC3L1Q86VI1 746 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 CAND1Q86VP6 1230 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 SLC26A11Q86WA9 606 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 TMEM173Q86WV6 379 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 LRRC6Q86X45 466 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 DIS3LQ8TF46 1054 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 BCL7CQ8WUZ0 217 aaPredicted RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 SLC44A1Q8WWI5 657 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 DPF3Q92784 378 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 STAMBPL1Q96FJ0 436 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 FCRL5Q96RD9 977 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 SMC6Q96SB8 1091 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 CLSTN3Q9BQT9 956 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 NSRP1Q9H0G5 558 aaKnown RBP10.44□□□□□ -0.74
MSH5-213ENST00000468136 SIK2Q9H0K1 926 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 OSER1Q9NX31 292 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 NEU3Q9UQ49 428 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 INSL6Q9Y581 213 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 PCDHA11Q9Y5I1 949 aa10.44□□□□□ -0.74
MSH5-213ENST00000468136 GMNCA6NCL1 334 aa10.43□□□□□ -0.74
MSH5-213ENST00000468136 ZNF840PA6NDX5 716 aa10.43□□□□□ -0.74
MSH5-213ENST00000468136 SMIM23A6NLE4 172 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms