RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 TRIM43BA6NCK2 446 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 MTSS1O43312 755 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 CPP00450 1065 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 TIMP1P01033 207 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 SLC2A3P11169 496 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 CSF2RAP15509 400 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 COG7P83436 770 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 ZBTB17Q13105 803 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 MPP2Q14168 576 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 TRIP4Q15650 581 aaPredicted RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 C10orf120Q5SQS8 335 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 KIAA1841Q6NSI8 718 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 LRRC8BQ6P9F7 803 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 ARHGAP36Q6ZRI8 547 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 NLRP14Q86W24 1093 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 SPATS2Q86XZ4 545 aaKnown RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 SLC39A11Q8N1S5 342 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 SHROOM3Q8TF72 1996 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 DCAKDQ8WVC6 231 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 DPF3Q92784 378 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 TRIM43Q96BQ3 446 aaPredicted RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 ZNF558Q96NG5 402 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 CYTH2Q99418 400 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 EBNA1BP2Q99848 306 aaKnown RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 GORASP1Q9BQQ3 440 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 CLSTN3Q9BQT9 956 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 TTLL2Q9BWV7 592 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 RC3H2Q9HBD1 1191 aaKnown RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 KCNK9Q9NPC2 374 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 PRDM5Q9NQX1 630 aaPredicted RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 OLA1Q9NTK5 396 aaKnown RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 NDFIP2Q9NV92 336 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 MARCH2Q9P0N8 246 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 MAGED2Q9UNF1 606 aaPredicted RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 TTLL3Q9Y4R7 772 aa9.22□□□□□ -0.93
TMEM254-209ENST00000467529 MRPL42Q9Y6G3 142 aaKnown RBP9.22□□□□□ -0.93
TMEM254-209ENST00000467529 SLC12A8A0AV02 714 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 GMNCA6NCL1 334 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 DFFAO00273 331 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 SEC24AO95486 1093 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 APOEP02649 317 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 C1QAP02745 245 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 SOD2P04179 222 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 HMBSP08397 361 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MLNP12872 115 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 KRT15P19012 456 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 STX2P32856 288 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 CD68P34810 354 aaPredicted RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MSH2P43246 934 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TUFMP49411 452 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 WDR5P61964 334 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 SPARCL1Q14515 664 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 KBTBD12Q3ZCT8 623 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TEX44Q53QW1 395 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MS4A13Q5J8X5 152 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 UNC5AQ6ZN44 842 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 PRPF39Q86UA1 669 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MIB1Q86YT6 1006 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 ZNF683Q8IZ20 524 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 LZTR1Q8N653 840 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 RTL3Q8N8U3 475 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 ATP6V0D2Q8N8Y2 350 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 ANKRD42Q8N9B4 389 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 ZSCAN18Q8TBC5 510 aaPredicted RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 AGAP3Q96P47 875 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TSGA13Q96PP4 275 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 CCT8L2Q96SF2 557 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TRIM56Q9BRZ2 755 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 UBE2OQ9C0C9 1292 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 SLC39A8Q9C0K1 460 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TRABDQ9H4I3 376 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MPP6Q9NZW5 540 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 RSPH14Q9UHP6 348 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 TRHDEQ9UKU6 1024 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 VANGL2Q9ULK5 521 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MAD1L1Q9Y6D9 718 aa9.21□□□□□ -0.93
TMEM254-209ENST00000467529 MYO18AQ92614 2054 aaKnown RBP9.21□□□□□ -0.93
TMEM254-209ENST00000467529 A0A1W2PPM1 405 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 WASH4PA8MWX3 477 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 NDUFAB1O14561 156 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.94
TMEM254-209ENST00000467529 KIAA0355O15063 1070 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 JCHAINP01591 159 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 IGLV3-27P01718 113 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 GSTA2P09210 222 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 ACRP10323 421 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 NFKB1P19838 968 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 CCNCP24863 283 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 DSG1Q02413 1049 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 ZNF33AQ06730 810 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 OLIG2Q13516 323 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 BTG3Q14201 252 aaPredicted RBP9.21□□□□□ -0.94
TMEM254-209ENST00000467529 AFMIDQ63HM1 303 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 ATPAF2Q8N5M1 289 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 MGARPQ8TDB4 240 aa9.21□□□□□ -0.94
TMEM254-209ENST00000467529 ZNF473Q8WTR7 871 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms