RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 TRAPPC3O43617 180 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 INHBAP08476 426 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 RALAP11233 206 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ZFXP17010 805 aaPredicted RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CHRM3P20309 590 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 NR1D1P20393 614 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 NFKBIAP25963 317 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 RPA1P27694 616 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 HIRAP54198 1017 aaPredicted RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 EPHB4P54760 987 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CASP9P55211 416 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CUL1Q13616 776 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ZRANB3Q5FWF4 1079 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 TBC1D9BQ66K14 1250 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CABP7Q86V35 215 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 PHC2Q8IXK0 858 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 BBS5Q8N3I7 341 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 HASPINQ8TF76 798 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 KTI12Q96EK9 354 aaPredicted RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CCDC51Q96ER9 411 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 FCRL4Q96PJ5 515 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SYNDIG1Q9H7V2 258 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 HESX1Q9UBX0 185 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 RPH3AQ9Y2J0 694 aaPredicted RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CBY1Q9Y3M2 126 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 BCL9O00512 1426 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 MYH7P12883 1935 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 UBR1Q8IWV7 1749 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 A0A1B0GTH6 734 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 LRRD1A4D1F6 860 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 GMNCA6NCL1 334 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 RRP8O43159 456 aaKnown RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 HSF2BPO75031 334 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 CRTAMO95727 393 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 PFKMP08237 780 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 EIF2DP41214 584 aaKnown RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 VEGFBP49765 207 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 PSMA6P60900 246 aaKnown RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 YPEL5P62699 121 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ERMARDQ5T6L9 678 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SH3PXD2AQ5TCZ1 1133 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 METAP1DQ6UB28 335 aaPredicted RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ZCCHC7Q8N3Z6 543 aaKnown RBP7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 LINC00301Q8NCQ3 95 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SLC5A5Q92911 643 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 FAM162AQ96A26 154 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ZIM3Q96PE6 472 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 C9orf16Q9BUW7 83 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 GPR63Q9BZJ6 419 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 GJB4Q9NTQ9 266 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 NUDT15Q9NV35 164 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 ATXN10Q9UBB4 475 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 BCS1LQ9Y276 419 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 STK38LQ9Y2H1 464 aa7.89□□□□□ -1.15
SPTBN1-204ENST00000467371 FAM237AA0A1B0GTK4 181 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 AQP12BA6NM10 295 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 AGRPO00253 132 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 CYTIPO60759 359 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 SCAF4O95104 1147 aaKnown RBP7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ATP2A2P16615 1042 aaKnown RBP7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ACADSBP45954 432 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 STARP49675 285 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 FAM189BP81408 668 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 TMEM62Q0P6H9 643 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ATXN7L2Q5T6C5 722 aaPredicted RBP7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 FAXCQ5TGI0 409 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 MFSD5Q6N075 450 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 BICDL1Q6ZP65 573 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 USP49Q70CQ1 688 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ZBTB33Q86T24 672 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 MREGQ8N565 214 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 SH2D3CQ8N5H7 860 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 TRAPPC9Q96Q05 1148 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 TWNKQ96RR1 684 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 SECISBP2Q96T21 854 aaKnown RBP7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 RUFY1Q96T51 708 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 TUBD1Q9UJT1 453 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ITGA11Q9UKX5 1188 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 TMCO1Q9UM00 188 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 LRRC42Q9Y546 428 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 CACNA1FO60840 1977 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 C3P01024 1663 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 AKAP12Q02952 1782 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 EREGO14944 169 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 N4BP3O15049 544 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 AXIN1O15169 862 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 CPN2P22792 545 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 PCP4P48539 62 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 RNF144AP50876 292 aaPredicted RBP7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 IL24Q13007 206 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 ADAM9Q13443 819 aa7.88□□□□□ -1.15
SPTBN1-204ENST00000467371 CAPSQ13938 189 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms