RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 LRIG3Q6UXM1 1119 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 SLC39A5Q6ZMH5 540 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 KRT77Q7Z794 578 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 ADGRF3Q8IZF5 1079 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 ZNF527Q8NB42 609 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 ZNF548Q8NEK5 533 aaPredicted RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 MPLKIPQ8TAP9 179 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 STYXQ8WUJ0 223 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 ZBTB9Q96C00 473 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 REXO5Q96IC2 774 aaKnown RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 TTC14Q96N46 770 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 TUBB6Q9BUF5 446 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 C9orf78Q9NZ63 289 aaPredicted RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 TRPC5Q9UL62 973 aaPredicted RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 MORC2Q9Y6X9 1032 aaPredicted RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 LGALS16A8MUM7 142 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 DNPH1O43598 174 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 UGDHO60701 494 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 SKAP2O75563 359 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 KAT7O95251 611 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 TNFRSF6BO95407 300 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 TGM2P21980 687 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 SCP2P22307 547 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 GRK5P34947 590 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 ME1P48163 572 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 POLGP54098 1239 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 TERF1P54274 439 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 FAM3BP58499 235 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 SF3A3Q12874 501 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS50-209ENST00000467326 TBX2Q13207 712 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 PDCD2Q16342 344 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 GET4Q7L5D6 327 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 MAATS1Q7Z4T9 603 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 IRF2BP2Q7Z5L9 587 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 MYLK4Q86YV6 388 aaPredicted RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 FAM47BQ8NA70 645 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 TBATAQ96M53 351 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 PIMREGQ9BSJ6 248 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 CRB3Q9BUF7 120 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 HTATIP2Q9BUP3 242 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 CCDC134Q9H6E4 229 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 OBP2BQ9NPH6 170 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 POT1Q9NUX5 634 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 CLIC5Q9NZA1 410 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 AGO2Q9UKV8 859 aaKnown RBP4.2□□□□□ -1.74
VPS50-209ENST00000467326 RAB21Q9UL25 225 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 ZBTB1Q9Y2K1 713 aa4.2□□□□□ -1.74
VPS50-209ENST00000467326 TRBV5-3A0A0A0MS03 114 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 ABHD14A-ACY1A0A1B0GW23 586 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 MYMKA6NI61 221 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 SLC38A8A6NNN8 435 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 F5H423 210 aaPredicted RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 SYT5O00445 386 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 NBNO60934 754 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 TULP3O75386 442 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 ITGA2BP08514 1039 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 PSG1P11464 419 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 PEPDP12955 493 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 IGFBP2P18065 325 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 RPL15P61313 204 aaKnown RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 TWIST1Q15672 202 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 MIDNQ504T8 468 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 PGBD2Q6P3X8 592 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 GGT6Q6P531 493 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 RSRC2Q7L4I2 434 aaKnown RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 ANKRD23Q86SG2 305 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 SUGP1Q8IWZ8 645 aaKnown RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 DDIASQ8IXT1 998 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 ARL14EPQ8N8R7 260 aaPredicted RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 SPATA5Q8NB90 893 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 SLC44A5Q8NCS7 719 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 OR52N4Q8NGI2 321 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 VCPIP1Q96JH7 1222 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 ZNF347Q96SE7 839 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 KATNAL1Q9BW62 490 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 SEMA4BQ9NPR2 832 aaPredicted RBP4.19□□□□□ -1.74
VPS50-209ENST00000467326 THSD1Q9NS62 852 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 ZBTB40Q9NUA8 1239 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 PGAP2Q9UHJ9 254 aa4.19□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3DA0A087WVF3 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3IA0A087WXS9 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3EA0A087X179 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3KA0A087X1G2 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 A0A0G2JK05 382 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 FAM170AA1A519 330 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3BA6NDS4 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3FA6NER0 549 aaPredicted RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3LB9A6J9 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 H3BNX3 289 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TLX3O43711 291 aaPredicted RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 PIP5K1CO60331 668 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 LARGE1O95461 756 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 TOMM40O96008 361 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 ALDOCP09972 364 aaKnown RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 TBC1D3HP0C7X1 549 aa4.18□□□□□ -1.74
VPS50-209ENST00000467326 PDIA3P30101 505 aaKnown RBP4.18□□□□□ -1.74
VPS50-209ENST00000467326 EIF5P55010 431 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms