RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NOTCH2Q04721 2471 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 MAP3K4Q9Y6R4 1608 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 TBX3O15119 743 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 SLC8A1P32418 973 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 HTR7P34969 479 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 PLCB4Q15147 1175 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 CNN3Q15417 329 aaKnown RBP4.23□□□□□ -1.73
XRN1-206ENST00000467077 ARHGAP29Q52LW3 1261 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 C8orf82Q6P1X6 216 aaPredicted RBP4.23□□□□□ -1.73
XRN1-206ENST00000467077 SLC16A12Q6ZSM3 486 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 FJX1Q86VR8 437 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 DCUN1D3Q8IWE4 304 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 LMNTD1Q8N9Z9 388 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 MBD3L2Q8NHZ7 208 aaPredicted RBP4.23□□□□□ -1.73
XRN1-206ENST00000467077 SPAG4Q9NPE6 437 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 SACM1LQ9NTJ5 587 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 L1RE1Q9UN81 338 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 GLI2P10070 1586 aa4.23□□□□□ -1.73
XRN1-206ENST00000467077 KIF21BO75037 1637 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 TRIM43BA6NCK2 446 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 A6NNZ2 444 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 FRS3O43559 492 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 IGHMBP2P38935 993 aaKnown RBP4.22□□□□□ -1.73
XRN1-206ENST00000467077 ERVK11-1P61568 191 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 APOA5Q6Q788 366 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 ZNF474Q6S9Z5 364 aaPredicted RBP4.22□□□□□ -1.73
XRN1-206ENST00000467077 GPSM1Q86YR5 675 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 ZNF485Q8NCK3 441 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 ASB12Q8WXK4 309 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 TRIM43Q96BQ3 446 aaPredicted RBP4.22□□□□□ -1.73
XRN1-206ENST00000467077 FAM204AQ9H8W3 233 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 DONSONQ9NYP3 566 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 DDX20Q9UHI6 824 aaKnown RBP4.22□□□□□ -1.73
XRN1-206ENST00000467077 MID2Q9UJV3 735 aa4.22□□□□□ -1.73
XRN1-206ENST00000467077 USP19O94966 1318 aa4.21□□□□□ -1.73
XRN1-206ENST00000467077 ZCCHC11Q5TAX3 1644 aaKnown RBP4.21□□□□□ -1.73
XRN1-206ENST00000467077 CFAP69A5D8W1 941 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 FOXO6A8MYZ6 492 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 NFATC1O95644 943 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 MTAPQ13126 283 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 KCNAB1Q14722 419 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 TDRD12Q587J7 1177 aaKnown RBP4.21□□□□□ -1.74
XRN1-206ENST00000467077 FSCBQ5H9T9 825 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 DCAF12L2Q5VW00 463 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 MYO1HQ8N1T3 1032 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 PMM1Q92871 262 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 STK32BQ9NY57 414 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 DKK4Q9UBT3 224 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 HPSEQ9Y251 543 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 COL2A1P02458 1487 aaPredicted RBP4.21□□□□□ -1.74
XRN1-206ENST00000467077 LMTK3Q96Q04 1460 aa4.21□□□□□ -1.74
XRN1-206ENST00000467077 PLB1Q6P1J6 1458 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 TEX14Q8IWB6 1497 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 ISM1B1AKI9 464 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 BRAFP15056 766 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 STAT6P42226 847 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 GLIPR1P48060 266 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 NOVP48745 357 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 CACNB3P54284 484 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 SUMO3P55854 103 aaPredicted RBP4.2□□□□□ -1.74
XRN1-206ENST00000467077 TRAF1Q13077 416 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 BFSP2Q13515 415 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 MYPOPQ86VE0 399 aaPredicted RBP4.2□□□□□ -1.74
XRN1-206ENST00000467077 TMED6Q8WW62 240 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 TSR2Q969E8 191 aaKnown RBP4.2□□□□□ -1.74
XRN1-206ENST00000467077 CPNE7Q9UBL6 633 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 TPCN1Q9ULQ1 816 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 ABCC2Q92887 1545 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 PTPRGP23470 1445 aa4.2□□□□□ -1.74
XRN1-206ENST00000467077 GOLGA6CA6NDK9 693 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 GOLGA6BA6NDN3 693 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 VSTM5A8MXK1 200 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 PAK4O96013 591 aaPredicted RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 GOLGA6DP0CG33 693 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 AZU1P20160 251 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 DRD1P21728 446 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 CRIP2P52943 208 aaPredicted RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 ZP1P60852 638 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 GBX1Q14549 363 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 GRM3Q14832 879 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 ACOX1Q15067 660 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 GFOD2Q3B7J2 385 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 STPG1Q5TH74 334 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 MANEALQ5VSG8 457 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 RNF220Q5VTB9 566 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 KYAT3Q6YP21 454 aaKnown RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 CHST15Q7LFX5 561 aaPredicted RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 CLIP4Q8N3C7 705 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 OR14A16Q8NHC5 309 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 IPCEF1Q8WWN9 437 aaPredicted RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 LRTOMTQ8WZ04 291 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 NMD3Q96D46 503 aaKnown RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 FIZ1Q96SL8 496 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 GOLGA6AQ9NYA3 693 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 AFF4Q9UHB7 1163 aaKnown RBP4.19□□□□□ -1.74
XRN1-206ENST00000467077 KIAA0586Q9BVV6 1533 aa4.19□□□□□ -1.74
XRN1-206ENST00000467077 EPRSP07814 1512 aaKnown RBP4.18□□□□□ -1.74
XRN1-206ENST00000467077 VWA5AO00534 786 aa4.18□□□□□ -1.74
XRN1-206ENST00000467077 TPP1O14773 563 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms