RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PCDHGB2Q9Y5G2 931 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 SNX11Q9Y5W9 270 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 TARSL2A2RTX5 802 aaKnown RBP19.8■□□□□ 0.76
COL9A3-206ENST00000466532 FAM47DPA6NHR8 397 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 F5H5T6 163 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 FLRT2O43155 660 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 GRIA4P48058 902 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 ECT2LQ008S8 904 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 APBA1Q02410 837 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 SFSWAPQ12872 951 aaKnown RBP19.8■□□□□ 0.76
COL9A3-206ENST00000466532 ARID5BQ14865 1188 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 TAF5Q15542 800 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 CST6Q15828 149 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 CAMK4Q16566 473 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 C9orf64Q5T6V5 341 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 RNF219Q5W0B1 726 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-206ENST00000466532 KIAA0895LQ68EN5 471 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 LAYNQ6UX15 382 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 GLRX5Q86SX6 157 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 APCDD1Q8J025 514 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 FAM204AQ9H8W3 233 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL9A3-206ENST00000466532 APEX2Q9UBZ4 518 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 SLC12A6Q9UHW9 1150 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 RALYQ9UKM9 306 aaKnown RBP19.8■□□□□ 0.76
COL9A3-206ENST00000466532 ANKRD6Q9Y2G4 727 aa19.8■□□□□ 0.76
COL9A3-206ENST00000466532 ITIH6Q6UXX5 1313 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SPEGQ15772 3267 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SYNJ2BP-COX16A0A087WUM0 186 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 EDDM13A0A1B0GTR0 161 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 A0A1W2PP55 124 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SRRM3A6NNA2 597 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 KCNU1A8MYU2 1149 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 MID1O15344 667 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 IGHV4-34P06331 123 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 EIF4EBP2Q13542 120 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SUZ12Q15022 739 aaKnown RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 DBX2Q6ZNG2 339 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 ADAT2Q7Z6V5 191 aaKnown RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SLCO6A1Q86UG4 719 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 PASD1Q8IV76 773 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 MMAAQ8IVH4 418 aaKnown RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 BAHD1Q8TBE0 780 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 RPL10LQ96L21 214 aaKnown RBP19.79■□□□□ 0.76
COL9A3-206ENST00000466532 CPXM1Q96SM3 734 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 COX16Q9P0S2 106 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SERGEFQ9UGK8 458 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 SLCO3A1Q9UIG8 710 aa19.79■□□□□ 0.76
COL9A3-206ENST00000466532 RNASEH2AO75792 299 aaKnown RBP19.78■□□□□ 0.76
COL9A3-206ENST00000466532 NUMBP49757 651 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 GALCP54803 685 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 CDK17Q00537 523 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 EXOC3L4Q17RC7 722 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 DEFB106AQ8N104 65 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 CCAR2Q8N163 923 aaKnown RBP19.78■□□□□ 0.76
COL9A3-206ENST00000466532 WDTC1Q8N5D0 677 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 RHBDD1Q8TEB9 315 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 SHC3Q92529 594 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 PPP1R13BQ96KQ4 1090 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 PRMT1Q99873 361 aaKnown RBP19.78■□□□□ 0.76
COL9A3-206ENST00000466532 OMDQ99983 421 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 ORAI3Q9BRQ5 295 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 NEUROG2Q9H2A3 272 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 DDIT4Q9NX09 232 aa19.78■□□□□ 0.76
COL9A3-206ENST00000466532 DOCK4Q8N1I0 1966 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
COL9A3-206ENST00000466532 KCNK3O14649 394 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 GLI1P08151 1106 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 SLC2A3P11169 496 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 ABCB4P21439 1286 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 PON1P27169 355 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 SLC8A1P32418 973 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 MTIF2P46199 727 aaKnown RBP19.77■□□□□ 0.76
COL9A3-206ENST00000466532 PSMD8P48556 350 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 STK19P49842 368 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-206ENST00000466532 UBE2HP62256 183 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 SLC12A1Q13621 1099 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 EFHC1Q5JVL4 640 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 RABGAP1LQ5R372 815 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 TTC39BQ5VTQ0 682 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-206ENST00000466532 NCEH1Q6PIU2 408 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 CIR1Q86X95 450 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-206ENST00000466532 IRF2BP1Q8IU81 584 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 RNF34Q969K3 372 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 IGSF8Q969P0 613 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 SLC2A13Q96QE2 648 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 FAM129BQ96TA1 746 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 CDC6Q99741 560 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 ASNSD1Q9NWL6 643 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 ADAMTS1Q9UHI8 967 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 FZD4Q9ULV1 537 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 PCDHGC3Q9UN70 934 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 BTBD3Q9Y2F9 522 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 FAM208BQ5VWN6 2430 aa19.77■□□□□ 0.76
COL9A3-206ENST00000466532 DMXL2Q8TDJ6 3036 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 A0A1B0GVM2 712 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 A0A1W2PPC4 97 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 TCAF2A6NFQ2 919 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 LRRC72A6NJI9 287 aa19.76■□□□□ 0.75
COL9A3-206ENST00000466532 HSF2BPO75031 334 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms