RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 C1orf53Q5VUE5 145 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 PID1Q7Z2X4 250 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 YTHDF3Q7Z739 585 aaKnown RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 ARHGAP18Q8N392 663 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 CELF6Q96J87 481 aaKnown RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 CWH43Q9H720 699 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 XAB2Q9HCS7 855 aaKnown RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 IGSF9Q9P2J2 1179 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 CDY1Q9Y6F8 540 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 GOLGA8RI6L899 631 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 ADAM12O43184 909 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 ASMTLO95671 621 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 MOCS2O96007 188 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 CPP00450 1065 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 HAPLN1P10915 354 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 MX2P20592 715 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
COL9A3-205ENST00000466192 ANKS4BQ8N8V4 417 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 DENND1AQ8TEH3 1009 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 MZB1Q8WU39 189 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 SLC44A1Q8WWI5 657 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 FBXO32Q969P5 355 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 LRRC39Q96DD0 335 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 SLC39A13Q96H72 371 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 VN1R3Q9BXE9 311 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 BRD8Q9H0E9 1235 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 YY1AP1Q9H869 796 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 TLR6Q9Y2C9 796 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 TTLL3Q9Y4R7 772 aa18.74■□□□□ 0.59
COL9A3-205ENST00000466192 TYROBPO43914 113 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 C1QAP02745 245 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 INHBAP08476 426 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 HOXC13P31276 330 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 GBP2P32456 591 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-205ENST00000466192 CDK16Q00536 496 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 CNKSR3Q6P9H4 555 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 CTAGE3PQ8IX95 158 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 KLF6Q99612 283 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-205ENST00000466192 EIF2B3Q9NR50 452 aaKnown RBP18.73■□□□□ 0.59
COL9A3-205ENST00000466192 KLHL8Q9P2G9 620 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-205ENST00000466192 HS3ST4Q9Y661 456 aa18.73■□□□□ 0.59
COL9A3-205ENST00000466192 GOLGA6L7A0A1B0GV03 622 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 RTN3O95197 1032 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 TBX18O95935 607 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 FOXN2P32314 431 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 TAF10Q12962 218 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 RASIP1Q5U651 963 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 PPM1NQ8N819 430 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 FBXO22Q8NEZ5 403 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 DPF3Q92784 378 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SPATA17Q96L03 361 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 GORASP1Q9BQQ3 440 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 TMEM39AQ9NV64 488 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 WBP1LQ9NX94 342 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 MRPL42Q9Y6G3 142 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 LAMA2P24043 3122 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 CXorf49A8MYA2 514 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SNX3O60493 162 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 FAM155BO75949 473 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 MAGEA9P43362 315 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 LIG3P49916 1009 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SLC18A1P54219 525 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SARNPP82979 210 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 EFEMP1Q12805 493 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 ZBTB17Q13105 803 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 SLC1A5Q15758 541 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 UNC5AQ6ZN44 842 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 CCDC121Q6ZUS5 278 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 C14orf80Q86SX3 495 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 TBC1D31Q96DN5 1066 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 EBNA1BP2Q99848 306 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 PIH1D1Q9NWS0 290 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 CLIC5Q9NZA1 410 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 GRID1Q9ULK0 1009 aa18.72■□□□□ 0.59
COL9A3-205ENST00000466192 KIAA0100Q14667 2235 aaKnown RBP18.72■□□□□ 0.59
COL9A3-205ENST00000466192 WDR27A2RRH5 827 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 ZBTB24O43167 697 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 ZNF189O75820 626 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 RPL17P18621 184 aaKnown RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 TAC1P20366 129 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 CD68P34810 354 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 HTR7P34969 479 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 SPARCL1Q14515 664 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 PIK3R6Q5UE93 754 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 LRRC8BQ6P9F7 803 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 ARHGAP12Q8IWW6 846 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 ZSCAN18Q8TBC5 510 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 GIPC2Q8TF65 315 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 OXCT2Q9BYC2 517 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 NDFIP2Q9NV92 336 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 IQANK1A0A1B0GTG1 560 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 E9PAM4 449 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 FGF10O15520 208 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-205ENST00000466192 APOEP02649 317 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 MLNP12872 115 aa18.71■□□□□ 0.59
COL9A3-205ENST00000466192 ATF6P18850 670 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms