RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NDFIP2Q9NV92 336 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 TMEM248Q9NWD8 314 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 THG1LQ9NWX6 298 aaKnown RBP11.48□□□□□ -0.57
VCP-204ENST00000466100 MPP6Q9NZW5 540 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 EFR3BQ9Y2G0 817 aa11.48□□□□□ -0.57
VCP-204ENST00000466100 MYO18AQ92614 2054 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 TBL1XO60907 577 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 NFATC1O95644 943 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 KRT10P13645 584 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 TCP1P17987 556 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 AMPD1P23109 780 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 CASQ1P31415 396 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 CDH4P55283 916 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 KLF1Q13351 362 aaPredicted RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 ZFYVE27Q5T4F4 411 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 AFMIDQ63HM1 303 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 NCBP2-AS2Q69YL0 99 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 CXorf57Q6NSI4 855 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 RWDD4Q6NW29 188 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 TPGS1Q6ZTW0 290 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 BBS12Q6ZW61 710 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 ETFBKMTQ8IXQ9 262 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 SLC44A3Q8N4M1 653 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 NPWQ8N729 165 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 PLD5Q8N7P1 536 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 TMA16Q96EY4 203 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 PBKQ96KB5 322 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 LMLNQ96KR4 655 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 ASB2Q96Q27 587 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 NOL6Q9H6R4 1146 aaKnown RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 TRPV5Q9NQA5 729 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 FBXO10Q9UK96 956 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 TTC7AQ9ULT0 858 aaPredicted RBP11.47□□□□□ -0.57
VCP-204ENST00000466100 CLEC4EQ9ULY5 219 aa11.47□□□□□ -0.57
VCP-204ENST00000466100 TCRBV7S2A1N4TA0A589 114 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 MFSD11O43934 449 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 CACNG3O60359 315 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 CLDN11O75508 207 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 LUC7L3O95232 432 aaKnown RBP11.46□□□□□ -0.57
VCP-204ENST00000466100 ADH1CP00326 375 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 ADH5P11766 374 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 TYRP14679 529 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 MAPKAPK2P49137 400 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 RUNX3Q13761 415 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 LLGL1Q15334 1064 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.57
VCP-204ENST00000466100 SEL1L2Q5TEA6 688 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 TFAP2DQ7Z6R9 452 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 C12orf40Q86WS4 652 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.57
VCP-204ENST00000466100 CCDC50Q8IVM0 306 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 ARHGAP12Q8IWW6 846 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 UMODL1-AS1Q8N2C9 162 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 CPA6Q8N4T0 437 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 OR52K2Q8NGK3 314 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 DDI1Q8WTU0 396 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 BHMTQ93088 406 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 CATSPERBQ9H7T0 1116 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 PRDM16Q9HAZ2 1276 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 PLK2Q9NYY3 685 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 GTSE1Q9NYZ3 720 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 TBC1D30Q9Y2I9 924 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 SAR1BQ9Y6B6 198 aa11.46□□□□□ -0.57
VCP-204ENST00000466100 TYW5A2RUC4 315 aaKnown RBP11.45□□□□□ -0.58
VCP-204ENST00000466100 NEDD8-MDP1E9PL57 170 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ZNF185O15231 689 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 NARSO43776 548 aaKnown RBP11.45□□□□□ -0.58
VCP-204ENST00000466100 CEP104O60308 925 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 CST8O60676 142 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 CYBBP04839 570 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 GBE1Q04446 702 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 GAD2Q05329 585 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 TFDP2Q14188 446 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ITPRIPL2Q3MIP1 535 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ODF2Q5BJF6 829 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 FSCBQ5H9T9 825 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 KAZNQ674X7 775 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
VCP-204ENST00000466100 KIAA0907Q7Z7F0 614 aaPredicted RBP11.45□□□□□ -0.58
VCP-204ENST00000466100 SETD3Q86TU7 594 aaPredicted RBP11.45□□□□□ -0.58
VCP-204ENST00000466100 RFX6Q8HWS3 928 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 CREG2Q8IUH2 290 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.45□□□□□ -0.58
VCP-204ENST00000466100 FIBINQ8TAL6 211 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ACTRT1Q8TDG2 376 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 DNASE1L2Q92874 299 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ALG14Q96F25 216 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 MS4A14Q96JA4 679 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 HEMGNQ9BXL5 484 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 LRRC19Q9H756 370 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 BRD9Q9H8M2 597 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 SLC2A4RGQ9NR83 387 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 STIM2Q9P246 746 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 OR51B4Q9Y5P0 310 aa11.45□□□□□ -0.58
VCP-204ENST00000466100 ILVBLA1L0T0 632 aa11.44□□□□□ -0.58
VCP-204ENST00000466100 APOC4-APOC2K7ER74 178 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms