RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ZYG11BQ9C0D3 744 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 RAB17Q9H0T7 212 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 GOLPH3Q9H4A6 298 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 PCDH18Q9HCL0 1135 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ARHGAP26Q9UNA1 814 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 UTP11Q9Y3A2 253 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 SH3BP1Q9Y3L3 701 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 GREB1Q4ZG55 1949 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CEP290O15078 2479 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 IGLV3-10A0A075B6K4 115 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 C3orf70A6NLC5 250 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 DRGXA6NNA5 263 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 FANCGO15287 622 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CCL16O15467 120 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ACSL4O60488 711 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CST8O60676 142 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SRGAP2O75044 1071 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 PAGE1O75459 146 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SOAT2O75908 522 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CPP00450 1065 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CKMP06732 381 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ITGAVP06756 1048 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MYL4P12829 197 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 EPCAMP16422 314 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 RHOQP17081 205 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 EPHB2P29323 1055 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 GJC1P36383 396 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 DNA2P51530 1060 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 NDST2P52849 883 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 DRG2P55039 364 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CDH4P55283 916 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CAV1Q03135 178 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SEMA3BQ13214 749 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ADAM15Q13444 863 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SLC12A1Q13621 1099 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 BYSLQ13895 437 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 COL19A1Q14993 1142 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 PAFAH1B3Q15102 231 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SMTNL2Q2TAL5 461 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MAP9Q49MG5 647 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 PPP6R3Q5H9R7 873 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 KCNT1Q5JUK3 1230 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SH3PXD2AQ5TCZ1 1133 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MANEALQ5VSG8 457 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 OTUD1Q5VV17 481 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 TIGD7Q6NT04 549 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ANKRD54Q6NXT1 300 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 C8orf74Q6P047 294 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC137Q6PK04 289 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 TMCO3Q6UWJ1 677 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MFSD7Q6UXD7 560 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CYP4V2Q6ZWL3 525 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 GAREM2Q75VX8 874 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CHST9Q7L1S5 443 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC91Q7Z6B0 441 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 PCGF5Q86SE9 256 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 GPR149Q86SP6 731 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 TMEM150AQ86TG1 271 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SETD3Q86TU7 594 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MIB1Q86YT6 1006 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CDKL3Q8IVW4 592 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC105Q8IYK2 499 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CMTM8Q8IZV2 173 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 LINC00528Q8N1L1 170 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MICALL1Q8N3F8 863 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 GPR152Q8TDT2 470 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 GDPD5Q8WTR4 605 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 RAPGEF5Q92565 580 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 NDRG1Q92597 394 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 FATE1Q969F0 183 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 NKD2Q969F2 451 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 EXOC4Q96A65 974 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 LRRC45Q96CN5 670 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CAPZA3Q96KX2 299 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 FCRL2Q96LA5 508 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CSPG4P5Q96PW8 444 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 PSMB7Q99436 277 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ADAM7Q9H2U9 754 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 CCSER2Q9H7U1 834 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 TRPV4Q9HBA0 871 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 TDP1Q9NUW8 608 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ARGLU1Q9NWB6 273 aaPredicted RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 THG1LQ9NWX6 298 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 OSER1Q9NX31 292 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MTMR10Q9NXD2 777 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 DNMT3BQ9UBC3 853 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 AMACRQ9UHK6 382 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 FAM50BQ9Y247 325 aa6.19□□□□□ -1.42
CHMP3-206ENST00000466032 MRPS23Q9Y3D9 190 aaKnown RBP6.19□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF638Q14966 1978 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SYNJ2BP-COX16A0A087WUM0 186 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 A0A1B0GVM2 712 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 A0A1W2PRU2 124 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 BCLAF3A2AJT9 711 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GOLGA6CA6NDK9 693 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GOLGA6BA6NDN3 693 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 TCAF2A6NFQ2 919 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms