RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ZMIZ2Q8NF64 920 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 OR10T2Q8NGX3 314 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 ABHD4Q8TB40 342 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 UBA3Q8TBC4 463 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 ZNF564Q8TBZ8 553 aaPredicted RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 SLC2A14Q8TDB8 520 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 IPO4Q8TEX9 1081 aaKnown RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 MYLIPQ8WY64 445 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 KLHL6Q8WZ60 621 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 IRGQQ8WZA9 623 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CD101Q93033 1021 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 ZNF653Q96CK0 615 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 SMARCD1Q96GM5 515 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 HES6Q96HZ4 224 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 PBKQ96KB5 322 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 C8orf48Q96LL4 319 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 C16orf45Q96MC5 204 aaPredicted RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 WDR24Q96S15 920 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CPXM1Q96SM3 734 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 NAPGQ99747 312 aaPredicted RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 TM9SF2Q99805 663 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 PLCD4Q9BRC7 762 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 C11orf70Q9BRQ4 267 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 TTPALQ9BTX7 342 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 NUP85Q9BW27 656 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 TLR10Q9BXR5 811 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 DPEP3Q9H4B8 488 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 RXFP1Q9HBX9 757 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CNGB3Q9NQW8 809 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS41-211ENST00000466017 RRN3Q9NYV6 651 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CTTNBP2NLQ9P2B4 639 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 MTRRQ9UBK8 725 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CACNG4Q9UBN1 327 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 TRIM10Q9UDY6 481 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 DNAI1Q9UI46 699 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CYTH4Q9UIA0 394 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 CDC23Q9UJX2 597 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 AMFRQ9UKV5 643 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 TTC7AQ9ULT0 858 aaPredicted RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 TFR2Q9UP52 801 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 COG5Q9UP83 839 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 PCDHB12Q9Y5F1 795 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 TIMM13Q9Y5L4 95 aaPredicted RBP5.74□□□□□ -1.49
VPS41-211ENST00000466017 IRAK3Q9Y616 596 aa5.74□□□□□ -1.49
VPS41-211ENST00000466017 FAM92AA1XBS5 289 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 MACROD2A1Z1Q3 448 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CCDC66A2RUB6 948 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 H0Y8X5 98 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 BUB1O43683 1085 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 BUB1BO60566 1050 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 PALMO75781 387 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 PROSCO94903 275 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 ENDOD1O94919 500 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 ABLIM3O94929 683 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CALCAP01258 141 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CTSAP10619 480 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 SDHBP21912 280 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 BMP8BP34820 402 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 PCK1P35558 622 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 BMPR1AP36894 532 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 TUFMP49411 452 aaKnown RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 RGS19P49795 217 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 PEX5P50542 639 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 NAP1L1P55209 391 aaKnown RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 PSMC1P62191 440 aaKnown RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 MRPS5P82675 430 aaKnown RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 AMPD2Q01433 879 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 KRT17Q04695 432 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 ITIH3Q06033 890 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 RAB33AQ14088 237 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CLUL1Q15846 466 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CTXN3Q4LDR2 81 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 MDH1BQ5I0G3 518 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 RTP2Q5QGT7 225 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 OLFML1Q6UWY5 402 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 MMS22LQ6ZRQ5 1243 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 SLC26A9Q7LBE3 791 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 ZNF572Q7Z3I7 529 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 BNIPLQ7Z465 357 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 PIGZQ86VD9 579 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 ZNF655Q8N720 491 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 ZNF461Q8TAF7 563 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 CENPIQ92674 756 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 DPF3Q92784 378 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 NT5C3BQ969T7 300 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 MYLPFQ96A32 169 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 PGAP3Q96FM1 320 aaPredicted RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 TMEM169Q96HH4 297 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 SPATA17Q96L03 361 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 DIRC2Q96SL1 478 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 YME1L1Q96TA2 773 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 SMOQ99835 787 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 GDF15Q99988 308 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 MCMBPQ9BTE3 642 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 DDX23Q9BUQ8 820 aaKnown RBP5.73□□□□□ -1.49
VPS41-211ENST00000466017 TRIM62Q9BVG3 475 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 SELENOOQ9BVL4 669 aa5.73□□□□□ -1.49
VPS41-211ENST00000466017 LGR4Q9BXB1 951 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms