RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 TMEM57Q8N5G2 664 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 IL17REQ8NFR9 667 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
SAMM50-202ENST00000465768 HIC2Q96JB3 615 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 NPAS1Q99742 590 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 ELOVL1Q9BW60 279 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 C9orf78Q9NZ63 289 aaPredicted RBP4.29□□□□□ -1.72
SAMM50-202ENST00000465768 PI4KBQ9UBF8 816 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 KCND3Q9UK17 655 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 RAB21Q9UL25 225 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 RPRD2Q5VT52 1461 aaKnown RBP4.29□□□□□ -1.72
SAMM50-202ENST00000465768 HFM1A2PYH4 1435 aa4.29□□□□□ -1.72
SAMM50-202ENST00000465768 TMEM2Q9UHN6 1383 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ZNF335Q9H4Z2 1342 aaPredicted RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 CYP3A7-CYP3A51PA0A087WV96 503 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 A0A1B0GVC2 190 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 TCRBV5S1A1TA0A578 114 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 TARM1B6A8C7 271 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 FYB1O15117 783 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ALDOAP04075 364 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 GPD1P21695 349 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 CYP3A7P24462 503 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 LMO1P25800 156 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 NDUFS1P28331 727 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 SLC8A1P32418 973 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 RCAN1P53805 252 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 RNASELQ05823 741 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 KCNB1Q14721 858 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 MFSD13AQ14CX5 517 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ZNF362Q5T0B9 420 aaPredicted RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 MAP3K21Q5TCX8 1036 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 KYAT3Q6YP21 454 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 DCDC5Q6ZRR9 648 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 SYT13Q7L8C5 426 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ASB12Q8WXK4 309 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 AKAP1Q92667 903 aaKnown RBP eCLIP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 HS6ST2Q96MM7 605 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 FYTTD1Q96QD9 318 aaKnown RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 TWNKQ96RR1 684 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 PIGSQ96S52 555 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ADGRE3Q9BY15 652 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 SYNPO2LQ9H987 977 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 CPNE5Q9HCH3 593 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 IL17RBQ9NRM6 502 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 SEMA4GQ9NTN9 838 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ARPP21Q9UBL0 812 aaPredicted RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ZNF69Q9UC07 566 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 VPS4AQ9UN37 437 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 DERAQ9Y315 318 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 WNT6Q9Y6F9 365 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 MED14O60244 1454 aa4.28□□□□□ -1.72
SAMM50-202ENST00000465768 ZNF142P52746 1687 aaPredicted RBP4.28□□□□□ -1.72
SAMM50-202ENST00000465768 UNC13BO14795 1591 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 EFCAB6Q5THR3 1501 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 ARHGAP23Q9P227 1491 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3DA0A087WVF3 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3IA0A087WXS9 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3EA0A087X179 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3KA0A087X1G2 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3BA6NDS4 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3FA6NER0 549 aaPredicted RBP4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3LB9A6J9 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 KRT38O76015 456 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 CHRM5P08912 532 aaPredicted RBP4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3HP0C7X1 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 RXRAP19793 462 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 RBM5P52756 815 aaKnown RBP eCLIP4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TLE2Q04725 743 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 PDCLQ13371 301 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 GAB1Q13480 694 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 CNGA3Q16281 694 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 CCDC142Q17RM4 750 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 AKNAD1Q5T1N1 836 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3GQ6DHY5 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3CQ6IPX1 549 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TMEM88Q6PEY1 159 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TMEM65Q6PI78 240 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 VSTM1Q6UX27 236 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 MMS22LQ6ZRQ5 1243 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 BBS12Q6ZW61 710 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 AMIGO2Q86SJ2 522 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 PRIMA1Q86XR5 153 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 TBC1D3Q8IZP1 549 aaPredicted RBP4.27□□□□□ -1.73
SAMM50-202ENST00000465768 PTGR2Q8N8N7 351 aaPredicted RBP4.27□□□□□ -1.73
SAMM50-202ENST00000465768 USP38Q8NB14 1042 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 COG8Q96MW5 612 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 CHODLQ9H9P2 273 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 SH3BP4Q9P0V3 963 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 BAG5Q9UL15 447 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 SLC12A4Q9UP95 1085 aa4.27□□□□□ -1.73
SAMM50-202ENST00000465768 RCE1Q9Y256 329 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms