RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF26P17031 533 aaPredicted RBP20.18■□□□□ 0.82
SDF4-205ENST00000465727 RAB6CQ53S08 254 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 PPM1JQ5JR12 505 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 OR6B2Q6IFH4 312 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 RSBN1LQ6PCB5 846 aaPredicted RBP20.18■□□□□ 0.82
SDF4-205ENST00000465727 PAOXQ6QHF9 649 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 LPCAT2Q7L5N7 544 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 SMYD1Q8NB12 490 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 ELOVL4Q9GZR5 314 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 RAB6CQ9H0N0 254 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 WDR41Q9HAD4 459 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 EFCAB1Q9HAE3 211 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MTMR10Q9NXD2 777 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 SLC17A6Q9P2U8 582 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 ZBTB12Q9Y330 459 aaPredicted RBP20.18■□□□□ 0.82
SDF4-205ENST00000465727 PSAT1Q9Y617 370 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MYOCOSA0A1B0GUC4 107 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 ACOT8O14734 319 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MAP3K6O95382 1288 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 P4HA1P13674 534 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 CYP2F1P24903 491 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MS4A2Q01362 244 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 PPP2R5DQ14738 602 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 FAM183BPQ6ZVS7 135 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 ZBTB8BQ8NAP8 495 aaPredicted RBP20.18■□□□□ 0.82
SDF4-205ENST00000465727 EME1Q96AY2 570 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 ZNF385DQ9H6B1 395 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 CYP3A43Q9HB55 503 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 MRPL40Q9NQ50 206 aaKnown RBP20.18■□□□□ 0.82
SDF4-205ENST00000465727 GPATCH2LQ9NWQ4 482 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 PACSIN3Q9UKS6 424 aa20.18■□□□□ 0.82
SDF4-205ENST00000465727 SRCAPQ6ZRS2 3230 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SLCO1B7G3V0H7 640 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 MPOP05164 745 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 CD97P48960 835 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 CDH8P55286 799 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SEL1L3Q68CR1 1132 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 CNTD1Q8N815 330 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 HM13Q8TCT9 377 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 TOP1MTQ969P6 601 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 RCN3Q96D15 328 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 TWNKQ96RR1 684 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SLC4A5Q9BY07 1137 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 OXCT2Q9BYC2 517 aaPredicted RBP20.17■□□□□ 0.82
SDF4-205ENST00000465727 NGRNQ9NPE2 291 aaKnown RBP20.17■□□□□ 0.82
SDF4-205ENST00000465727 PNPLA3Q9NST1 481 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 MYRFQ9Y2G1 1151 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 RAP2CQ9Y3L5 183 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 A0A0A0MRY4 1105 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 ARHGEF37A1IGU5 675 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 HACD1B0YJ81 288 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 G3V2L1 256 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 ZNF701M0R085 212 aaPredicted RBP20.17■□□□□ 0.82
SDF4-205ENST00000465727 VWA5AO00534 786 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 POLBP06746 335 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SDC4P31431 198 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 ACADVLP49748 655 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 PRKAA2P54646 552 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SLC10A2Q12908 348 aaPredicted RBP20.17■□□□□ 0.82
SDF4-205ENST00000465727 ART3Q13508 389 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 KCNT2Q6UVM3 1135 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 Q6ZNX1 250 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 CARM1Q86X55 608 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 SPATA13Q96N96 652 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 RRN3Q9NYV6 651 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 VTI1BQ9UEU0 232 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 NR2E3Q9Y5X4 410 aa20.17■□□□□ 0.82
SDF4-205ENST00000465727 PARP14Q460N5 1801 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 SPDYE16A6NNV3 312 aaPredicted RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 IL18RAPO95256 599 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 APOA4P06727 396 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 KRT19P08727 400 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 SPRP35270 261 aaPredicted RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 GBE1Q04446 702 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 PDAP1Q13442 181 aaKnown RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 CYTH1Q15438 398 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 TARBP2Q15633 366 aaKnown RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 DPYSL2Q16555 572 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 LSM12Q3MHD2 195 aaKnown RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 MGAT5BQ3V5L5 792 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 PPM1LQ5SGD2 360 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 NAPRTQ6XQN6 538 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 SLC7A14Q8TBB6 771 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 ASB9Q96DX5 294 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 KLHL32Q96NJ5 620 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 OSBPL6Q9BZF3 934 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 GBA2Q9HCG7 927 aaPredicted RBP20.16■□□□□ 0.82
SDF4-205ENST00000465727 VPS45Q9NRW7 570 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 RNF11Q9Y3C5 154 aa20.16■□□□□ 0.82
SDF4-205ENST00000465727 H3BNH8 94 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 NOP56O00567 594 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 PRKCBP05771 671 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 PKNOX1P55347 436 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 ORC1Q13415 861 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 CA9Q16790 459 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms