RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 TOR1BO14657 336 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 RPP40O75818 363 aaKnown RBP5.04□□□□□ -1.6
CDK13-203ENST00000465643 GH2P01242 217 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 AKR1B1P15121 316 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 HSPA4P34932 840 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 MSX2P35548 267 aaPredicted RBP5.04□□□□□ -1.6
CDK13-203ENST00000465643 AARSP49588 968 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDK13-203ENST00000465643 LOXL3P58215 753 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 CAP1Q01518 475 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 TFAP4Q01664 338 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 UBE3AQ05086 875 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 GABPAQ06546 454 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 PIGFQ07326 219 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 PDCLQ13371 301 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 TRPC3Q13507 836 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 ATP1A4Q13733 1029 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 NECTIN1Q15223 517 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 CD300EQ496F6 205 aaPredicted RBP5.04□□□□□ -1.6
CDK13-203ENST00000465643 RGS7BPQ6MZT1 257 aaPredicted RBP5.04□□□□□ -1.6
CDK13-203ENST00000465643 RASGRP2Q7LDG7 609 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 SCYL3Q8IZE3 742 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 NCOA7Q8NI08 942 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 ESR2Q92731 530 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 CCDC17Q96LX7 622 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 TWNKQ96RR1 684 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 MECRQ9BV79 373 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 KRT23Q9C075 422 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 FAM83DQ9H4H8 585 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 HECAQ9UBI9 543 aaPredicted RBP5.04□□□□□ -1.6
CDK13-203ENST00000465643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDK13-203ENST00000465643 TMEM98Q9Y2Y6 226 aa5.04□□□□□ -1.6
CDK13-203ENST00000465643 NEDD4P46934 1319 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 DDX60LQ5H9U9 1706 aaKnown RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 ADAMTS20P59510 1910 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 OR2W5A6NFC9 320 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 E7EVH7 732 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 ORC4O43929 436 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 NOBOXO60393 691 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 CER1O95813 267 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 TK1P04183 234 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 PCP11498 1178 aaKnown RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 IRAK1P51617 712 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 LINC00310P59036 64 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 ACTR2P61160 394 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 MAPK7Q13164 816 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 VGLL4Q14135 290 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 KRT32Q14532 448 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 SHROOM1Q2M3G4 852 aaPredicted RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 GALNTL6Q49A17 601 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 TATDN1Q6P1N9 297 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 MDGA1Q8NFP4 955 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 OR6Y1Q8NGX8 325 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 HDAC2Q92769 488 aaKnown RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 JAKMIP1Q96N16 626 aaKnown RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 AGXT2Q9BYV1 514 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 TRIM5Q9C035 493 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 TWSG1Q9GZX9 223 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 TMOD4Q9NZQ9 345 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 DNAJB11Q9UBS4 358 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 ZNF112Q9UJU3 913 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 FBXO2Q9UK22 296 aaPredicted RBP5.03□□□□□ -1.6
CDK13-203ENST00000465643 SLC13A4Q9UKG4 626 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 SNX14Q9Y5W7 946 aa5.03□□□□□ -1.6
CDK13-203ENST00000465643 ERICH2A1L162 156 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 CD3EAPO15446 510 aaKnown RBP5.02□□□□□ -1.61
CDK13-203ENST00000465643 CCNT2O60583 730 aaKnown RBP5.02□□□□□ -1.61
CDK13-203ENST00000465643 VNN1O95497 513 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 ASNSP08243 561 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 PEPDP12955 493 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 TAL1P17542 331 aaPredicted RBP5.02□□□□□ -1.61
CDK13-203ENST00000465643 PSMA5P28066 241 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 SLC5A2P31639 672 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 MAGEA10P43363 369 aaPredicted RBP5.02□□□□□ -1.61
CDK13-203ENST00000465643 JAG1P78504 1218 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 TLE2Q04725 743 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 LY6KQ17RY6 165 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 ZNF385BQ569K4 471 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 ATPAF1Q5TC12 328 aaPredicted RBP5.02□□□□□ -1.61
CDK13-203ENST00000465643 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 MFSD5Q6N075 450 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 C16orf54Q6UWD8 224 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 STOX1Q6ZVD7 989 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 TMEM179Q6ZVK1 233 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 CHST3Q7LGC8 479 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 TMPRSS9Q7Z410 1059 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 FAM124AQ86V42 546 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 NRSN1Q8IZ57 195 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 SPARTQ8N0X7 666 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 C11orf44Q8N8P7 122 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 Q8NA96 180 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 UCMAQ8WVF2 138 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 NEK1Q96PY6 1258 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 PNKPQ96T60 521 aa5.02□□□□□ -1.61
CDK13-203ENST00000465643 UBAC1Q9BSL1 405 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms