RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	MNS1	Q8NEH6	495 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	SPATA4	Q8NEY3	305 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	DDI1	Q8WTU0	396 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	C1orf54	Q8WWF1	131 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	ATG4A	Q8WYN0	398 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	FGF14	Q92915	247 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	OTUB2	Q96DC9	234 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	NDFIP2	Q9NV92	336 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	TMEM248	Q9NWD8	314 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	DUS2	Q9NX74	493 aa	Known RBP	13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	EPS15L1	Q9UBC2	864 aa		13.78	□□□□□ -0.2
ATF3-208	ENST00000465155	MYOF	Q9NZM1	2061 aa		13.77	□□□□□ -0.2
ATF3-208	ENST00000465155	NUP205	Q92621	2012 aa		13.77	□□□□□ -0.2
ATF3-208	ENST00000465155		A0A1B0GVM2	712 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CTAGE15	A4D2H0	777 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	TCAF2	A6NFQ2	919 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	WASH4P	A8MWX3	477 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CYBB	P04839	570 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CTAGE8	P0CG41	777 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	OR1E1	P30953	314 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	SERPINB6	P35237	376 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	IFNAR2	P48551	515 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CDH4	P55283	916 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	OTUD4	Q01804	1114 aa	Known RBP	13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	SLC10A2	Q12908	348 aa	Predicted RBP	13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	LEXM	Q3ZCV2	418 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	MPPE1	Q53F39	396 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CTAGE6	Q86UF2	777 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CTAGE4	Q8IX94	777 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	ADGRG2	Q8IZP9	1017 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CCDC33	Q8N5R6	958 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	KIAA1958	Q8N8K9	716 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	MAFA	Q8NHW3	353 aa	Predicted RBP	13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	ACTL9	Q8TC94	416 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	OSCP1	Q8WVF1	389 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	ELSPBP1	Q96BH3	223 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	ZFYVE19	Q96K21	471 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	PLA2G2F	Q9BZM2	168 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	RBM12	Q9NTZ6	932 aa	Known RBP	13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	THG1L	Q9NWX6	298 aa	Known RBP	13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	PLK2	Q9NYY3	685 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	DTL	Q9NZJ0	730 aa		13.77	□□□□□ -0.21
ATF3-208	ENST00000465155	CLDN11	O75508	207 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	SNX1	Q13596	522 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	GRM2	Q14416	872 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	NOMO1	Q15155	1222 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	TRIM68	Q6AZZ1	485 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	MTSS1L	Q765P7	747 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	TMEM25	Q86YD3	366 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	MFSD6L	Q8IWD5	586 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	YAF2	Q8IY57	180 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	IRF7	Q92985	503 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	ASIC4	Q96FT7	647 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	P2RY11	Q96G91	374 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	CELF6	Q96J87	481 aa	Known RBP	13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	KLC2	Q9H0B6	622 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	SPHK2	Q9NRA0	654 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	HOMER3	Q9NSC5	361 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	DONSON	Q9NYP3	566 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	ZNF212	Q9UDV6	495 aa		13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.76	□□□□□ -0.21
ATF3-208	ENST00000465155	C2CD4D	B7Z1M9	353 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	CCDC188	H7C350	402 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	LIAS	O43766	372 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	PHF2	O75151	1096 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	ECI2	O75521	394 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	PSMC3	P17980	439 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	HOXD9	P28356	352 aa	Predicted RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	NR2C2	P49116	596 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	MAPKAPK2	P49137	400 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	EIF3E	P60228	445 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	FCHO2	Q0JRZ9	810 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	SMAD2	Q15796	467 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	CCNG2	Q16589	344 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	CYP1B1	Q16678	543 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	EML3	Q32P44	896 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	MPP7	Q5T2T1	576 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	BZW1	Q7L1Q6	419 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	CHST9	Q7L1S5	443 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	ZC3H18	Q86VM9	953 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	TP53INP2	Q8IXH6	220 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	KLHL7	Q8IXQ5	586 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	CARNMT1	Q8N4J0	409 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	LZTR1	Q8N653	840 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	MAGOHB	Q96A72	148 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	PHF7	Q9BWX1	381 aa	Predicted RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	BBS2	Q9BXC9	721 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	DDX47	Q9H0S4	455 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	RETREG1	Q9H6L5	497 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	DNPEP	Q9ULA0	475 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	NUMBL	Q9Y6R0	609 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	SHROOM3	Q8TF72	1996 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	NEDD8-MDP1	E9PL57	170 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155		H0Y626	953 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	DFFA	O00273	331 aa		13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	RIOK3	O14730	519 aa	Known RBP	13.75	□□□□□ -0.21
ATF3-208	ENST00000465155	MCF2L	O15068	1137 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms