RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PHTF2Q8N3S3 785 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 ATP6V0D2Q8N8Y2 350 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 SLC35G2Q8TBE7 412 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 AZIN2Q96A70 460 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 TRIM44Q96DX7 344 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 KLF16Q9BXK1 252 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 IRX2Q9BZI1 471 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 ANAPC7Q9UJX3 599 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 PATE3B3GLJ2 98 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 PJA2O43164 708 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 IRAK2O43187 625 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 MTA2O94776 668 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 TBX18O95935 607 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 P2RY2P41231 377 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 DHPSP49366 369 aaPredicted RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 HADHBP55084 474 aaKnown RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 NAP1L1P55209 391 aaKnown RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 GAD2Q05329 585 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 EOGTQ5NDL2 527 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 RNF10Q8N5U6 811 aaKnown RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 EMC1Q8N766 993 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 RLN3Q8WXF3 142 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 PIWIL1Q96J94 861 aaKnown RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 WDCPQ9H6R7 721 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 POLMQ9NP87 494 aaPredicted RBP18.05■□□□□ 0.48
CPSF4-209ENST00000465132 TMEM9BQ9NQ34 198 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 ADGRG1Q9Y653 693 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 ABCA7Q8IZY2 2146 aa18.05■□□□□ 0.48
CPSF4-209ENST00000465132 FAM170AA1A519 330 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 GOLGA6L9A6NEM1 432 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 GIPC1O14908 333 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ATMINO43313 823 aaPredicted RBP18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ADAM23O75077 832 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ENDOD1O94919 500 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 CHKAP35790 457 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 SLC1A1P43005 524 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 PGFP49763 221 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 RPL7AP62424 266 aaKnown RBP18.04■□□□□ 0.48
CPSF4-209ENST00000465132 NME3Q13232 169 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 HADHQ16836 314 aaKnown RBP18.04■□□□□ 0.48
CPSF4-209ENST00000465132 CCDC14Q49A88 953 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ZNF662Q6ZS27 426 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 HTR3DQ70Z44 454 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 LPCAT2Q7L5N7 544 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 TAC4Q86UU9 113 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ETFBKMTQ8IXQ9 262 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 NIPA2Q8N8Q9 360 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 JOSD2Q8TAC2 188 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 PIGKQ92643 395 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 CENPIQ92674 756 aaPredicted RBP18.04■□□□□ 0.48
CPSF4-209ENST00000465132 BTN2A3PQ96KV6 586 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 CFAP57Q96MR6 1250 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 PACSIN1Q9BY11 444 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 ZDHHC4Q9NPG8 344 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 SFMBT1Q9UHJ3 866 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 NUDT5Q9UKK9 219 aa18.04■□□□□ 0.48
CPSF4-209ENST00000465132 CDX4O14627 284 aaPredicted RBP18.03■□□□□ 0.48
CPSF4-209ENST00000465132 HOXC11O43248 304 aaPredicted RBP18.03■□□□□ 0.48
CPSF4-209ENST00000465132 MAP3K13O43283 966 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 IGLV3-25P01717 112 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 MAN1A1P33908 653 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 PCK1P35558 622 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 IRX4P78413 519 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 ATP11AP98196 1134 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 MAP7D1Q3KQU3 841 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 HS1BP3Q53T59 392 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 SH3PXD2AQ5TCZ1 1133 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 BBS7Q8IWZ6 715 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 SYCE1Q8N0S2 351 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 FRMD1Q8N878 549 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 ACRBPQ8NEB7 543 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 FAM172AQ8WUF8 416 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 HMGB4Q8WW32 186 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 SPACA7Q96KW9 195 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 TBCBQ99426 244 aa18.03■□□□□ 0.48
CPSF4-209ENST00000465132 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
CPSF4-209ENST00000465132 EVLQ9UI08 416 aaPredicted RBP18.03■□□□□ 0.48
CPSF4-209ENST00000465132 MBD1Q9UIS9 605 aaPredicted RBP18.03■□□□□ 0.48
CPSF4-209ENST00000465132 USP24Q9UPU5 2620 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 TYW5A2RUC4 315 aaKnown RBP18.02■□□□□ 0.48
CPSF4-209ENST00000465132 TBC1D3BA6NDS4 549 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 PRPSAP2O60256 369 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 TULP3O75386 442 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 STC2O76061 302 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 IGLV3-27P01718 113 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 MSNP26038 577 aaKnown RBP18.02■□□□□ 0.48
CPSF4-209ENST00000465132 CXCR3P49682 368 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 CDO1Q16878 200 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.48
CPSF4-209ENST00000465132 TMEFF1Q8IYR6 380 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 NAT16Q8N8M0 369 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 KCNV2Q8TDN2 545 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 WBP2Q969T9 261 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 ARHGEF26Q96DR7 871 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 DESI2Q9BSY9 194 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 SPHK2Q9NRA0 654 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 DEC1Q9P2X7 70 aa18.02■□□□□ 0.48
CPSF4-209ENST00000465132 NUP205Q92621 2012 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 THADAQ6YHU6 1953 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms