RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 EPC1Q9H2F5 836 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 BCCIPQ9P287 314 aaKnown RBP eCLIP17.58■□□□□ 0.4
VPS52-215ENST00000464425 GPR179Q6PRD1 2367 aa17.58■□□□□ 0.4
VPS52-215ENST00000464425 ANKRD62A6NC57 917 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 RPP40O75818 363 aaKnown RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 MYBL1P10243 752 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 POLR2EP19388 210 aaKnown RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 CNR2P34972 360 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 PTPN9P43378 593 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 GFPT1Q06210 699 aaPredicted RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 ZNF234Q14588 700 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 FUT11Q495W5 492 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 RASSF3Q86WH2 238 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 TRIM11Q96F44 468 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 BAG1Q99933 345 aaPredicted RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 TMEM51Q9NW97 253 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 KIAA1522Q9P206 1035 aaPredicted RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 PLA2G4CQ9UP65 541 aa17.57■□□□□ 0.4
VPS52-215ENST00000464425 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
VPS52-215ENST00000464425 RIF1Q5UIP0 2472 aaKnown RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 USP34Q70CQ2 3546 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 DCLK1O15075 740 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 SRGAP2O75044 1071 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 LCA5LO95447 670 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 ATP5BP06576 529 aaKnown RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 CSKP41240 450 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 HDAC4P56524 1084 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 MAMLD1Q13495 774 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 FNDC3BQ53EP0 1204 aaKnown RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 PPP1R15BQ5SWA1 713 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 CCDC122Q5T0U0 273 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 TTC39BQ5VTQ0 682 aaPredicted RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 SERPINA13PQ6UXR4 307 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 GAB3Q8WWW8 586 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 CENPIQ92674 756 aaPredicted RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 PDLIM2Q96JY6 352 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 C1orf74Q96LT6 269 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 PARVAQ9NVD7 372 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 INTS6Q9UL03 887 aaKnown RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 PTPRZ1P23471 2315 aaPredicted RBP17.56■□□□□ 0.4
VPS52-215ENST00000464425 SDK1Q7Z5N4 2213 aa17.56■□□□□ 0.4
VPS52-215ENST00000464425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 A0A1B0GVM2 712 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 TCAF2A6NFQ2 919 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 NPC1O15118 1278 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ZBTB24O43167 697 aaPredicted RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 CCP110O43303 1012 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 CNTN5O94779 1100 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 HLA-EP13747 358 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 GABRG2P18507 467 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 PRKCHP24723 683 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ADRA1BP35368 520 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ZNF143P52747 638 aaPredicted RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 OGDHQ02218 1023 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ZNF177Q13360 481 aaPredicted RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 STARD3Q14849 445 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 PTPRNQ16849 979 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ARL13BQ3SXY8 428 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 USP39Q53GS9 565 aaKnown RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 PITRM1Q5JRX3 1037 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 PLEKHA7Q6IQ23 1121 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 SCYL2Q6P3W7 929 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 LRRC31Q6UY01 552 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 STRADAQ7RTN6 431 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 TMEM139Q8IV31 216 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ZNF683Q8IZ20 524 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 APCDD1Q8J025 514 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 RLN3Q8WXF3 142 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 ZNF653Q96CK0 615 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 HAPLN3Q96S86 360 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 HINFPQ9BQA5 517 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 MAGEB5Q9BZ81 275 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 SLC6A17Q9H1V8 727 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 MYO1AQ9UBC5 1043 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 CNOT8Q9UFF9 292 aaKnown RBP17.55■□□□□ 0.4
VPS52-215ENST00000464425 RAB23Q9ULC3 237 aa17.55■□□□□ 0.4
VPS52-215ENST00000464425 EIF3CLB5ME19 914 aaKnown RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 E9PAM4 449 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 SYNCRIPO60506 623 aaKnown RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 MOCS3O95396 460 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 EPHX1P07099 455 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 MZF1P28698 734 aaPredicted RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 CYLC1P35663 651 aaPredicted RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 CTSOP43234 321 aaPredicted RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 ENPP2Q13822 863 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 E2F5Q15329 346 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 C5orf22Q49AR2 442 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 ALFQ53S48 1182 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 CXorf57Q6NSI4 855 aaKnown RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 KBTBD6Q86V97 674 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 CCDC185Q8N715 623 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 ZNF366Q8N895 744 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 TTC17Q96AE7 1141 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 EIF3CQ99613 913 aaKnown RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 CNPY3Q9BT09 278 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 CD248Q9HCU0 757 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms