RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 DRAP1Q14919 205 aaPredicted RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 TTC31Q49AM3 519 aaPredicted RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 PTPN20Q4JDL3 420 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 FBXL22Q6P050 247 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 OLFML1Q6UWY5 402 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 CIR1Q86X95 450 aaPredicted RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 CCAR2Q8N163 923 aaKnown RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 RPL10LQ96L21 214 aaKnown RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 SCNM1Q9BWG6 230 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 PABPC3Q9H361 631 aaKnown RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 SYNCQ9H7C4 482 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 SAMSN1Q9NSI8 373 aaKnown RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 FBXL12Q9NXK8 326 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.47■□□□□ 0.71
SF3A1-205ENST00000463818 SLCO1B1Q9Y6L6 691 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 CKAP5Q14008 2032 aa19.47■□□□□ 0.71
SF3A1-205ENST00000463818 A0A1B0GVT2 93 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 TARSL2A2RTX5 802 aaKnown RBP19.46■□□□□ 0.71
SF3A1-205ENST00000463818 PES1O00541 588 aaKnown RBP19.46■□□□□ 0.71
SF3A1-205ENST00000463818 FSBPO95073 299 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 NOS2P35228 1153 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 NME3Q13232 169 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 SLC12A1Q13621 1099 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 RABGAP1LQ5R372 815 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 KLHDC7AQ5VTJ3 777 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 RNF219Q5W0B1 726 aaPredicted RBP19.46■□□□□ 0.71
SF3A1-205ENST00000463818 USP30Q70CQ3 517 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 SLC26A9Q7LBE3 791 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 FAM129BQ96TA1 746 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 GAREM1Q9H706 876 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 IL21RQ9HBE5 538 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 SCML1Q9UN30 329 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 PCDHB9Q9Y5E1 797 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 PCDH15Q96QU1 1955 aa19.46■□□□□ 0.71
SF3A1-205ENST00000463818 MAP1BP46821 2468 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 EDDM13A0A1B0GTR0 161 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 MID1O15344 667 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 PDGFRAP16234 1089 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 MZF1P28698 734 aaPredicted RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 MATKP42679 507 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 NUMBP49757 651 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 AFF3P51826 1226 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 SFSWAPQ12872 951 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 AUHQ13825 339 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 RAPGEF1Q13905 1077 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 KCNJ12Q14500 433 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 TRIP6Q15654 476 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 HLA-BQ31612 363 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 IL27RAQ6UWB1 636 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 ZNF397Q8NF99 534 aaPredicted RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 IGSF8Q969P0 613 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 BIRC7Q96CA5 298 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
SF3A1-205ENST00000463818 NEUROG2Q9H2A3 272 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 FHOD1Q9Y613 1164 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 ADAMTS9Q9P2N4 1935 aa19.45■□□□□ 0.7
SF3A1-205ENST00000463818 A0A1B0GVM2 712 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 TCAF2A6NFQ2 919 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 C1QTNF9BB2RNN3 333 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 M0QYT0 321 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 HYAL3O43820 417 aaPredicted RBP19.44■□□□□ 0.7
SF3A1-205ENST00000463818 DAB1O75553 588 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 PROS1P07225 676 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 C1QTNF9P0C862 333 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 CYP11B1P15538 503 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 CD27P26842 260 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 SLC8A1P32418 973 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 RDXP35241 583 aaKnown RBP19.44■□□□□ 0.7
SF3A1-205ENST00000463818 NNMTP40261 264 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 STK19P49842 368 aaPredicted RBP19.44■□□□□ 0.7
SF3A1-205ENST00000463818 PLK1P53350 603 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 RNASE9P60153 205 aaKnown RBP19.44■□□□□ 0.7
SF3A1-205ENST00000463818 SULT2A1Q06520 285 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 CST6Q15828 149 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 TTC39BQ5VTQ0 682 aaPredicted RBP19.44■□□□□ 0.7
SF3A1-205ENST00000463818 C14orf80Q86SX3 495 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 ZDHHC17Q8IUH5 632 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 NAXDQ8IW45 347 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 STK40Q8N2I9 435 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 TMEM35BQ8NCS4 154 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 PTPRN2Q92932 1015 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 TM9SF3Q9HD45 589 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 OSGEPQ9NPF4 335 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 LMBRD1Q9NUN5 540 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 SERGEFQ9UGK8 458 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 HS3ST4Q9Y661 456 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 ITIH6Q6UXX5 1313 aa19.44■□□□□ 0.7
SF3A1-205ENST00000463818 NUMA1Q14980 2115 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 A0A1W2PP55 124 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 FAM47DPA6NHR8 397 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 PAGE1O75459 146 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 CER1O95813 267 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 GALCP54803 685 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 OXCT1P55809 520 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 MTA1Q13330 715 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 TEAD4Q15561 434 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 KIF19Q2TAC6 998 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms