RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 GOT1L1Q8NHS2 421 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NCOA7Q8NI08 942 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SEPT1Q8WYJ6 367 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 OSBP2Q969R2 916 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 LRGUKQ96M69 825 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PWWP2AQ96N64 755 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RUNDC3BQ96NL0 473 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 BTBD9Q96Q07 612 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CHID1Q9BWS9 393 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NMUR2Q9GZQ4 415 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NAA50Q9GZZ1 169 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CLPBQ9H078 707 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TRPV6Q9H1D0 765 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 C12orf65Q9H3J6 166 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EPS8L2Q9H6S3 715 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 GPAMQ9HCL2 828 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EPS15L1Q9UBC2 864 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FAM8A1Q9UBU6 413 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CYB5R1Q9UHQ9 305 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PACSIN3Q9UKS6 424 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MRPS7Q9Y2R9 242 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SQORQ9Y6N5 450 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 STK36Q9NRP7 1315 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 A0A1W2PQJ5 194 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FAM172BPA6NC97 362 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 C2orf81A6NN90 581 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MTSS1O43312 755 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EXTL3O43909 919 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CCNT2O60583 730 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SGPL1O95470 568 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANXA1P04083 346 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MYL2P10916 166 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PSMC3P17980 439 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ITIH1P19827 911 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 M6PRP20645 277 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ITGALP20701 1170 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAGP20916 626 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAP4P27816 1152 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MSX1P28360 303 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EEF1DP29692 281 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 LRPAP1P30533 357 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HPCAL1P37235 193 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ABCG1P45844 678 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SLC26A2P50443 739 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RCAN1P53805 252 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ALDH18A1P54886 795 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IRX4P78413 519 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CDKL1Q00532 357 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CTBSQ01459 385 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CAP1Q01518 475 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PRKCQQ04759 706 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CLCQ05315 142 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAPK7Q13164 816 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MTM1Q13496 603 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 OXA1LQ15070 435 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZMYND11Q15326 602 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SLC1A5Q15758 541 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 INAVAQ3KP66 663 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 LSM12Q3MHD2 195 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TNFAIP8L3Q5GJ75 292 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RALGPS1Q5JS13 557 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FAM209BQ5JX69 171 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MIIPQ5JXC2 388 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TREML4Q6UXN2 200 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM26Q6ZUK4 368 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FRA10AC1Q70Z53 315 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PRPF39Q86UA1 669 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZC3H7AQ8IWR0 971 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC105Q8IYK2 499 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANKRD53Q8N9V6 530 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TP53I13Q8NBR0 393 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PJA1Q8NG27 643 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANGPTL6Q8NI99 470 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SCFD1Q8WVM8 642 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NXPE3Q969Y0 559 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 VPS33AQ96AX1 596 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SGF29Q96ES7 293 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DMRTB1Q96MA1 342 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CFAP57Q96MR6 1250 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PIP5K1AQ99755 562 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM246Q9BRR3 403 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MCMBPQ9BTE3 642 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IDI2Q9BXS1 227 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 AGXT2Q9BYV1 514 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ROPN1BQ9BZX4 212 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MKRN2Q9H000 416 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HIPK3Q9H422 1215 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ROPN1Q9HAT0 212 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DNAJC28Q9NX36 388 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 GRHL1Q9NZI5 618 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KANSL3Q9P2N6 904 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DBF4Q9UBU7 674 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 REV1Q9UBZ9 1251 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DNAJB4Q9UDY4 337 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TEKT2Q9UIF3 430 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZNRF3Q9ULT6 936 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAN2B2Q9Y2E5 1009 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FLT4P35916 1363 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM75PA6NK02 468 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF839A8K0R7 811 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms