RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CARNMT1Q8N4J0 409 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 HJURPQ8NCD3 748 aaPredicted RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 TATDN2Q93075 761 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 MRGPRX3Q96LB0 322 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 ZNF578Q96N58 590 aaPredicted RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 SERTAD1Q9UHV2 236 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 TSPAN16Q9UKR8 245 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 CEP83Q9Y592 693 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 KNTC1P50748 2209 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 TTC34A8MYJ7 566 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 IL1BP01584 269 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 RPL13P26373 211 aaKnown RBP15□□□□□ -0.01
SMC1A-204ENST00000463684 SLC6A4P31645 630 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 ADPRHP54922 357 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 DAB2P98082 770 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 OVGP1Q12889 678 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 CDH18Q13634 790 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 STAT4Q14765 748 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 PROX2Q3B8N5 592 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 FAM133BQ5BKY9 247 aaKnown RBP15□□□□□ -0.01
SMC1A-204ENST00000463684 ARHGAP40Q5TG30 622 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 RESP18Q5W5W9 173 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15□□□□□ -0.01
SMC1A-204ENST00000463684 KANSL1Q7Z3B3 1105 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 IQCHQ86VS3 1027 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 SPATS2Q86XZ4 545 aaKnown RBP15□□□□□ -0.01
SMC1A-204ENST00000463684 AADATQ8N5Z0 425 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 FBXL13Q8NEE6 735 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 AZIN2Q96A70 460 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 PAGE5Q96GU1 130 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 LMLNQ96KR4 655 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 FAM129BQ96TA1 746 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 CNGB3Q9NQW8 809 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 RAB20Q9NX57 234 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 INTS6Q9UL03 887 aaKnown RBP15□□□□□ -0.01
SMC1A-204ENST00000463684 PCDHA7Q9UN72 937 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 TENM4Q6N022 2769 aa15□□□□□ -0.01
SMC1A-204ENST00000463684 LATO43561 262 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 SIGLEC6O43699 453 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 SDC3O75056 442 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 LCP1P13796 627 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 NUDT1P36639 197 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 NNMTP40261 264 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 TBX4P57082 545 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 ECT2LQ008S8 904 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 ZNF211Q13398 564 aaPredicted RBP14.99□□□□□ -0.01
SMC1A-204ENST00000463684 ADAM9Q13443 819 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 NFIL3Q16649 462 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 PKDCCQ504Y2 493 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 PITRM1Q5JRX3 1037 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 MSANTD2Q6P1R3 559 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 SCML4Q8N228 414 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 STK40Q8N2I9 435 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 KCTD13Q8WZ19 329 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 SEMA4DQ92854 862 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 CCDC47Q96A33 483 aaKnown RBP14.99□□□□□ -0.01
SMC1A-204ENST00000463684 KDM4CQ9H3R0 1056 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 CLMPQ9H6B4 373 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 CPNE5Q9HCH3 593 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 DMTF1Q9Y222 760 aa14.99□□□□□ -0.01
SMC1A-204ENST00000463684 ZNF462Q96JM2 2506 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 CFAP46Q8IYW2 2715 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 PLXNA2O75051 1894 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 C10orf142B7Z368 130 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 B8ZZF3 427 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 STX10O60499 249 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 IGLV3-27P01718 113 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 SETSIPP0DME0 302 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 CD19P15391 556 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 MAT2AP31153 395 aaKnown RBP14.98□□□□□ -0.01
SMC1A-204ENST00000463684 CTSOP43234 321 aaPredicted RBP14.98□□□□□ -0.01
SMC1A-204ENST00000463684 DAOAP59103 153 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 PPP2CBP62714 309 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 RPS24P62847 133 aaKnown RBP14.98□□□□□ -0.01
SMC1A-204ENST00000463684 PPP2CAP67775 309 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 KCNC4Q03721 635 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 SLCO3A1Q9UIG8 710 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 PCDHB1Q9Y5F3 818 aa14.98□□□□□ -0.01
SMC1A-204ENST00000463684 ITIH6Q6UXX5 1313 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 TRIM38O00635 465 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 ACTN4O43707 911 aaKnown RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 MPOP05164 745 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 MYL1P05976 194 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 VDRP11473 427 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 C6P13671 934 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 MZF1P28698 734 aaPredicted RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 MXI1P50539 228 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 ERVPABLB-1P60509 514 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 YWHAEP62258 255 aaKnown RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 GABREP78334 506 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 ELAVL3Q14576 367 aaKnown RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 FOXD4L6Q3SYB3 417 aaPredicted RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 FSCBQ5H9T9 825 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 NADSYN1Q6IA69 706 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 FOXD4L3Q6VB84 417 aaPredicted RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 CFAP52Q8N1V2 620 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 FAM181AQ8N9Y4 354 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms