RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 INHBAP08476 426 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 RPL17P18621 184 aaKnown RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 MAGEA11P43364 429 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 DUSP4Q13115 394 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 MGAT5BQ3V5L5 792 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 PIK3R6Q5UE93 754 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 CASC4Q6P4E1 433 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 CES3Q6UWW8 571 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SLC39A5Q6ZMH5 540 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 USP33Q8TEY7 942 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 DIS3LQ8TF46 1054 aaKnown RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 IL37Q9NZH6 218 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 UBP1Q9NZI7 540 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 OR6C75A6NL08 312 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 NCAM2O15394 837 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 JCHAINP01591 159 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 NFKB1P19838 968 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 TAC1P20366 129 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 MX2P20592 715 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 HOXC13P31276 330 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SERPINB6P35237 376 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 TUBP50607 506 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 TAF10Q12962 218 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 GPR17Q13304 367 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SPRED3Q2MJR0 410 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 NUGGCQ68CJ6 796 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 ANKRD33Q7Z3H0 272 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 LRRC6Q86X45 466 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 OR52K1Q8NGK4 314 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 GIPC2Q8TF65 315 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 STAMBPL1Q96FJ0 436 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SLC39A13Q96H72 371 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 SMG5Q9UPR3 1016 aaKnown RBP13.14□□□□□ -0.31
VAPB-203ENST00000463370 RAD54BQ9Y620 910 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 CDY1Q9Y6F8 540 aa13.14□□□□□ -0.31
VAPB-203ENST00000463370 HMX2A2RU54 273 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 E9PAM4 449 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 CDK16Q00536 496 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 PPP2R5DQ14738 602 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 TEX44Q53QW1 395 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 OTOP3Q7RTS5 596 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 CACNA2D3Q8IZS8 1091 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MAGEB18Q96M61 343 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 SERPINB11Q96P15 392 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 APOL2Q9BQE5 337 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 FERMT1Q9BQL6 677 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 SEZ6LQ9BYH1 1024 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 SLC39A8Q9C0K1 460 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
VAPB-203ENST00000463370 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 SDR42E2A6NKP2 422 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 PYGBP11216 843 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MLNP12872 115 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 ADRA1DP25100 572 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 YWHAQP27348 245 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
VAPB-203ENST00000463370 KCTD11Q693B1 232 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 TBC1D31Q96DN5 1066 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 GBA3Q9H227 469 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
VAPB-203ENST00000463370 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 IKBKGQ9Y6K9 419 aa13.13□□□□□ -0.31
VAPB-203ENST00000463370 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 TRIM49D1C9J1S8 452 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 TRDMT1O14717 391 aaKnown RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 AP2A1O95782 977 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 MT-ND3P03897 115 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 ATF6P18850 670 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 SLC18A1P54219 525 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 MLLT6P55198 1093 aaPredicted RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
VAPB-203ENST00000463370 PSMD5Q16401 504 aa13.12□□□□□ -0.31
VAPB-203ENST00000463370 STEAP4Q687X5 459 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms