RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PCED1AQ9H1Q7 454 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SLC6A17Q9H1V8 727 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SMOC1Q9H4F8 434 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 TMEM63CQ9P1W3 806 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 XPO7Q9UIA9 1087 aaKnown RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SLC25A13Q9UJS0 675 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.25
HDAC1-203ENST00000463172 PILRBQ9UKJ0 227 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SLC6A14Q9UN76 642 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 SPTBN2O15020 2390 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 DCHS1Q96JQ0 3298 aa13.52□□□□□ -0.25
HDAC1-203ENST00000463172 TARSL2A2RTX5 802 aaKnown RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 DCDC2BA2VCK2 349 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 PAGE1O75459 146 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 IGLV3-19P01714 112 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 CYP1A1P04798 512 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 CALB1P05937 261 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 SYPP08247 313 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 FERP16591 822 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ITPKAP23677 461 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 RDXP35241 583 aaKnown RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 CXCR3P49682 368 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 KLK7P49862 253 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 TPMTP51580 245 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 COPAP53621 1224 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 AUHQ13825 339 aaKnown RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 PTPRNQ16849 979 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ARL13BQ3SXY8 428 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 PEAR1Q5VY43 1037 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 TCEAL6Q6IPX3 200 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 FBXL22Q6P050 247 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 SLC23A3Q6PIS1 610 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 GANCQ8TET4 914 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 TCEAL3Q969E4 200 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF419Q96HQ0 510 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 SIK2Q9H0K1 926 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-203ENST00000463172 VANGL2Q9ULK5 521 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 ERVW-1Q9UQF0 538 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 HS3ST4Q9Y661 456 aa13.51□□□□□ -0.25
HDAC1-203ENST00000463172 MUC22E2RYF6 1773 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-203ENST00000463172 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 LNP1A1A4G5 178 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 SERPINF2P08697 491 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 MMP8P22894 467 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 SDC4P31431 198 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF165P49910 485 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 PLK1P53350 603 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 CDH4P55283 916 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 FMO1Q01740 532 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 NCAPHQ15003 741 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 HNRNPA1L2Q32P51 320 aaKnown RBP13.5□□□□□ -0.25
HDAC1-203ENST00000463172 FSCBQ5H9T9 825 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 MMS22LQ6ZRQ5 1243 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 DSG4Q86SJ6 1040 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 SLC20A1Q8WUM9 679 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 LMLNQ96KR4 655 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 C1orf74Q96LT6 269 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 SELENOOQ9BVL4 669 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 BTBD1Q9H0C5 482 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 LAMA1P25391 3075 aa13.5□□□□□ -0.25
HDAC1-203ENST00000463172 ATXN2Q99700 1313 aaKnown RBP13.49□□□□□ -0.25
HDAC1-203ENST00000463172 CACNA1EQ15878 2313 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 C4orf47A7E2U8 309 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 EPHB6O15197 1021 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 PDGFRAP16234 1089 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 KCNA4P22459 653 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 KRT83P78385 493 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 IRX4P78413 519 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 CENPCQ03188 943 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 KLHL40Q2TBA0 621 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 PPM1JQ5JR12 505 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 C6orf118Q5T5N4 469 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 USP30Q70CQ3 517 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF366Q8N895 744 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 MYEOVQ96EZ4 313 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 HAPLN3Q96S86 360 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 TBCBQ99426 244 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 C11orf70Q9BRQ4 267 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 ZDHHC5Q9C0B5 715 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 MUC3BQ9H195 1237 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 RSPH9Q9H1X1 276 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-203ENST00000463172 SGK2Q9HBY8 427 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 METTL5Q9NRN9 209 aaKnown RBP13.49□□□□□ -0.25
HDAC1-203ENST00000463172 ADAM22Q9P0K1 906 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 VPS28Q9UK41 221 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms