RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TTC31Q49AM3 519 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 C5orf22Q49AR2 442 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PTPN20Q4JDL3 420 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 HSP90AA4PQ58FG1 418 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PITRM1Q5JRX3 1037 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 BRMS1LQ5PSV4 323 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 C9orf64Q5T6V5 341 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 RNF219Q5W0B1 726 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF776Q68DI1 518 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 OLFML1Q6UWY5 402 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 RBM43Q6ZSC3 357 aaKnown RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 FAM183BPQ6ZVS7 135 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 USP30Q70CQ3 517 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ARCQ7LC44 396 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ERICH1Q86X53 443 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF677Q86XU0 584 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 CCAR2Q8N163 923 aaKnown RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MINDY1Q8N5J2 469 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF366Q8N895 744 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MSANTD4Q8NCY6 345 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 NT5C3BQ969T7 300 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PGAP3Q96FM1 320 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MYO19Q96H55 970 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 MRGPRX3Q96LB0 322 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 C1orf74Q96LT6 269 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PRICKLE1Q96MT3 831 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 NPY6RQ99463 290 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 CNTNAP3Q9BZ76 1288 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 BTBD1Q9H0C5 482 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 RSPH9Q9H1X1 276 aaPredicted RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 WDCPQ9H6R7 721 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 FAM204AQ9H8W3 233 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 OSGEPQ9NPF4 335 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 XPO7Q9UIA9 1087 aaKnown RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 SLCO3A1Q9UIG8 710 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 DAAM1Q9Y4D1 1078 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 PAXBP1Q9Y5B6 917 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 CEP295Q9C0D2 2601 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ITIH6Q6UXX5 1313 aa7.52□□□□□ -1.21
PTPRF-210ENST00000463041 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
PTPRF-210ENST00000463041 SYNJ2BP-COX16A0A087WUM0 186 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 EDDM13A0A1B0GTR0 161 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 A0A1B0GVM2 712 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 LRRC10BA6NIK2 292 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 GIPC1O14908 333 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 SIN3BO75182 1162 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 CLDN11O75508 207 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 DAB1O75553 588 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 GJB3O75712 270 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 SEMA4FO95754 770 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF883P0CG24 379 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 CD59P13987 128 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 SLC8A1P32418 973 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ACSL1P33121 698 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 CXCR3P49682 368 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 RNASE9P60153 205 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 NME3Q13232 169 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF177Q13360 481 aaPredicted RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 AUHQ13825 339 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 SLC25A52Q3SY17 297 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 CDKAL1Q5VV42 579 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FBXL22Q6P050 247 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 SASS6Q6UVJ0 657 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 LRSAM1Q6UWE0 723 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 MMS22LQ6ZRQ5 1243 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FAM124AQ86V42 546 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 APCDD1Q8J025 514 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 DEFB124Q8NES8 71 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 C1orf216Q8TAB5 229 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 GANCQ8TET4 914 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 RPRD1AQ96P16 312 aaPredicted RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FAM129BQ96TA1 746 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FEM1AQ9BSK4 669 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 MIR1-1HGQ9H1L0 117 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 VPS16Q9H269 839 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 PABPC3Q9H361 631 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FSCN3Q9NQT6 498 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ANO10Q9NW15 660 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FBXL12Q9NXK8 326 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ARHGEF38Q9NXL2 777 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 COX16Q9P0S2 106 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 EIF2B4Q9UI10 523 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
PTPRF-210ENST00000463041 STAP1Q9ULZ2 295 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 HS3ST4Q9Y661 456 aa7.51□□□□□ -1.21
PTPRF-210ENST00000463041 ARID1BQ8NFD5 2236 aaPredicted RBP7.5□□□□□ -1.21
PTPRF-210ENST00000463041 LRRC72A6NJI9 287 aa7.5□□□□□ -1.21
PTPRF-210ENST00000463041 DRGXA6NNA5 263 aa7.5□□□□□ -1.21
PTPRF-210ENST00000463041 TTC34A8MYJ7 566 aa7.5□□□□□ -1.21
PTPRF-210ENST00000463041 PAGE1O75459 146 aa7.5□□□□□ -1.21
PTPRF-210ENST00000463041 TRIM16O95361 564 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms