RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 CBX2Q14781 532 aaPredicted RBP18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 KCTD19Q17RG1 926 aaPredicted RBP18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 ANKS4BQ8N8V4 417 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 CCDC197Q8NCU1 140 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 MDM1Q8TC05 714 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 ATG4AQ8WYN0 398 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 NT5C3BQ969T7 300 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 CCDC114Q96M63 670 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 SLC46A2Q9BY10 475 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 KDM4CQ9H3R0 1056 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 LGALS13Q9UHV8 139 aa18.61■□□□□ 0.57
ATPAF2-202ENST00000462733 TRAV19A0A0A6YYK7 116 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SLC12A8A0AV02 714 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 H0YHG0 523 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 RNF8O76064 485 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 CKMP06732 381 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 ABHD2P08910 425 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 ADCY8P40145 1251 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 TAS2R40P59535 323 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SCYL2Q6P3W7 929 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 ZNF276Q8N554 614 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 NIPA2Q8N8Q9 360 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SMRP1Q8NCR6 262 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 RIPOR3Q96MK2 946 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SERPINB11Q96P15 392 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 HERPUD2Q9BSE4 406 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 TASP1Q9H6P5 420 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SMPD4Q9NXE4 827 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SMIM23A6NLE4 172 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 IRAK2O43187 625 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 HMBSP08397 361 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 DDX6P26196 483 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 RDXP35241 583 aaKnown RBP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 HDAC4P56524 1084 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 KLHDC10Q6PID8 442 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 STRADAQ7RTN6 431 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 PIGWQ7Z7B1 504 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 RIBC1Q8N443 379 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 ARFGAP1Q8N6T3 406 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 CENPIQ92674 756 aaPredicted RBP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 CCDC77Q9BR77 488 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 SMG9Q9H0W8 520 aaKnown RBP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 PIGVQ9NUD9 493 aa18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 R3HDM2Q9Y2K5 976 aaKnown RBP18.6■□□□□ 0.57
ATPAF2-202ENST00000462733 LRCH4O75427 683 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 TJP3O95049 919 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 IGLV3-25P01717 112 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 MTHFRP42898 656 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 STAT4Q14765 748 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 POTEHQ6S545 545 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 BNIPLQ7Z465 357 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 FAM131BQ86XD5 332 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 CCDC13Q8IYE1 715 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 TTC16Q8NEE8 873 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 RNF34Q969K3 372 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 ZSWIM3Q96MP5 696 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 GKN1Q9NS71 199 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 DDX56Q9NY93 547 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 SAMD15Q9P1V8 674 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 PCSK1NQ9UHG2 260 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 ACTL7BQ9Y614 415 aa18.59■□□□□ 0.57
ATPAF2-202ENST00000462733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 OLFM2O95897 454 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 IRF1P10914 325 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 TCF4P15884 667 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 MIPP30301 263 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 CHKAP35790 457 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 AVPR1AP37288 418 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 TBX4P57082 545 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 ACAP1Q15027 740 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 ANKRD20A8PQ5CZ79 823 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 EXOC3L1Q86VI1 746 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 NPAS3Q8IXF0 933 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 CMTM8Q8IZV2 173 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 ZCCHC9Q8N567 271 aaKnown RBP18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 FGF13Q92913 245 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 HLA-CQ95604 372 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 PGAP3Q96FM1 320 aaPredicted RBP18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 POMKQ9H5K3 350 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 NINJ2Q9NZG7 142 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 USP15Q9Y4E8 981 aaPredicted RBP18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 CPQQ9Y646 472 aa18.58■□□□□ 0.57
ATPAF2-202ENST00000462733 DOCK8Q8NF50 2099 aa18.58■□□□□ 0.56
ATPAF2-202ENST00000462733 ENDOD1O94919 500 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 ACSL3O95573 720 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 F9P00740 461 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 GSTA1P08263 222 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 GJC1P36383 396 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 SLCO1A2P46721 670 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 UBAP2Q5T6F2 1119 aaKnown RBP18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 IZUMO3Q5VZ72 239 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 HIBCHQ6NVY1 386 aaPredicted RBP18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 CCT6BQ92526 530 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 ARHGEF2Q92974 986 aaKnown RBP18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 TTC25Q96NG3 672 aa18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 KLF16Q9BXK1 252 aaPredicted RBP18.57■□□□□ 0.56
ATPAF2-202ENST00000462733 FRMD8P1Q9BZ68 369 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms