RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ZCCHC10Q8TBK6 192 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 LINC00476Q8WZB0 136 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 NCSTNQ92542 709 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 RNFT2Q96EX2 444 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 MASTLQ96GX5 879 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 GPR78Q96P69 363 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 FYTTD1Q96QD9 318 aaKnown RBP3.47□□□□□ -1.85
VCL-203ENST00000461383 BARD1Q99728 777 aaKnown RBP3.47□□□□□ -1.85
VCL-203ENST00000461383 CTDSP1Q9GZU7 261 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 INTS2Q9H0H0 1204 aaKnown RBP3.47□□□□□ -1.85
VCL-203ENST00000461383 TBC1D22BQ9NU19 505 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 MTMR4Q9NYA4 1195 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 SH3BP4Q9P0V3 963 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 CAMK2AQ9UQM7 478 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 B3GNT3Q9Y2A9 372 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 CNPY2Q9Y2B0 182 aa3.47□□□□□ -1.85
VCL-203ENST00000461383 FSD2A1L4K1 749 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 NPIPB13A6NJU9 1138 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 NPIPB5A8MRT5 1133 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 NPIPB4C9JG80 1138 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 UBE2Q2LH0YL09 131 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 DSCR3O14972 297 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 STRNO43815 780 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 HBP1O60381 514 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 TIPRLO75663 272 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 RNASEH2AO75792 299 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 KAT7O95251 611 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 SLPIP03973 132 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 HNRNPCP07910 306 aaKnown RBP eCLIP3.46□□□□□ -1.86
VCL-203ENST00000461383 ELFN1P0C7U0 828 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 LYL1P12980 280 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 PKMP14618 531 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 PRPH2P23942 346 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 ITPKBP27987 946 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 MCM7P33993 719 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 ADRA1BP35368 520 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 PLA2G5P39877 138 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 MPLP40238 635 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 GDF5P43026 501 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 POLD2P49005 469 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 ARF3P61204 181 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 ARF1P84077 181 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 GAB1Q13480 694 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 BYSLQ13895 437 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 ZNF169Q14929 603 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 KPNB1Q14974 876 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 AP5B1Q2VPB7 878 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 ANXA2RQ3ZCQ2 193 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 HECTD2Q5U5R9 776 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 FNDC7Q5VTL7 733 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 CFAP161Q6P656 301 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 DHRS13Q6UX07 377 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 BCDIN3DQ7Z5W3 292 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 TICAM2Q86XR7 235 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 LAS2Q8IYD9 372 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 ZNF366Q8N895 744 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 TNIP2Q8NFZ5 429 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 RFWD2Q8NHY2 731 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 RUFY2Q8WXA3 655 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 CENPIQ92674 756 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 CUL5Q93034 780 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 HIC2Q96JB3 615 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 NPAS1Q99742 590 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 MACROD1Q9BQ69 325 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 SDF4Q9BRK5 362 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 CHCHD6Q9BRQ6 235 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 FUZQ9BT04 418 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 THAP7Q9BT49 309 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 HDHD5Q9BXW7 423 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 SCAND2PQ9GZW5 306 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 NUAK2Q9H093 628 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 SLC25A18Q9H1K4 315 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 IL21RQ9HBE5 538 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 TLR8Q9NR97 1041 aaKnown RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 SYBUQ9NX95 663 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 TAS2R10Q9NYW0 307 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 KLQ9UEF7 1012 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 MAFFQ9ULX9 164 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 RABGAP1Q9Y3P9 1069 aa3.46□□□□□ -1.86
VCL-203ENST00000461383 SIRT4Q9Y6E7 314 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 EPN1Q9Y6I3 576 aaPredicted RBP3.46□□□□□ -1.86
VCL-203ENST00000461383 PGPEP1LA6NFU8 196 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 TMEM191CA6NGB0 347 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 PRSS47A8MTI9 375 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 TMEM232C9JQI7 657 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 NPIPB8E9PQR5 432 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 F5H0A9 414 aaPredicted RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 PRYO14603 147 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 JTBO76095 146 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 CNTN5O94779 1100 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 TMEM63AO94886 807 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 FSHBP01225 129 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ENO1P06733 434 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 IGFBP2P18065 325 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 HOXD12P35452 270 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 ARL3P36405 182 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 HARS2P49590 506 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 CCT4P50991 539 aaKnown RBP3.45□□□□□ -1.86
VCL-203ENST00000461383 DCAF7P61962 342 aa3.45□□□□□ -1.86
VCL-203ENST00000461383 HOXA4Q00056 320 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms